Alosa sapidissima (American shad): 121708553
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Entry
121708553 CDS
T11137
Symbol
ap2b1
Name
(RefSeq) AP-2 complex subunit beta isoform X1
KO
K11825
AP-2 complex subunit beta-1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04142
Lysosome biogenesis
asad04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121708553 (ap2b1)
04142 Lysosome biogenesis
121708553 (ap2b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121708553 (ap2b1)
Membrane trafficking [BR:
asad04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
121708553 (ap2b1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
Alpha_adaptinC2
HEAT
Arm
PDS5
HEAT_EZ
Cnd3
HEAT_GCN1
HEAT_MROH2B_C
NELF-A_N
Arm_2
PIK3R4-like_middle
HEAT_spiro
API5
Alpha_adaptin_C
Motif
Other DBs
NCBI-GeneID:
121708553
NCBI-ProteinID:
XP_041947218
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All DBs
Position
5:36533853..36560101
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AA seq
953 aa
AA seq
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MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE
YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANA
VAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDEREAQSI
CERVTPRLSHANSAVVLSAVKVLMKFLELLPKESDYYNTLLKKLSPPLVTLLSGEPEVQY
VALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKE
YATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRK
YPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQV
QLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVTAKEV
VLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPNAFVEGSHGIHRKHLPIQHGSI
DTGESPVSASPAAPIDQPQVIPSQGDLLGDLLNLDLGPPVNVPQVSSMQMGAVDLLGGGL
DSLLGGDLGGGVGGSPAVGQNFIPSSVPNTFAPSPTPAPMSSGLNDLFELSTGMAITTGG
YVAPKAVWLPAVKAKGLEISGTFSRRQGHMYMDMTFTNKALQHMTDFAIQFNKNSFGVIP
TTPLAVHTPLMPSQSIDISLPLNTIGPVMKMDPLNNLQVAVKNNIDVFYFSGLIPLSVFF
VEDGKMERQVFLATWKDIPNENELQYQIKECHLNADTDTVSGKLQNNNIYTIAKRNVEGQ
DMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYVYQMYDSILKN
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgactgactcaaagtattttacaactaacaaaaaaggtgaaatctttgaactgaaggct
gaactgaacaatgagaagaaggagaagaggaaggaggctgtgaagaaagtcattgcagcc
atgaccgtaggaaaagacgtgagctctcttttcccggatgtggtgaactgtatgcagact
gataacctggagctaaagaagcttgtttatctgtacctgatgaactatgccaagagtcag
ccagatatggccatcatggctgtcaacagctttgttaaggactgcgaggatcccaaccct
ctgatccgggctctggccgtgcgcaccatgggctgcatccgcgtggacaagatcaccgag
tacctgtgcgagcccctgcggaagtgtctgaaggacgaggacccttacgtgaggaagact
gcggccgtgtgcgtggccaaactccatgacatcaatgcccagatggtggaggaccagggt
ttcctggactccctgagggacctcatcgctgattccaaccccatggtggtggccaatgcc
gtggcagccctttcggagatcagtgagtcccatcccaacagcaacctgctggacctaaac
ccgcagaacatcaacaagctgctcaccgccctcaacgagtgcaccgagtggggccagatc
ttcatcctggactgcctgtccaactacaaccccaaagacgagcgcgaggcccagagcatc
tgtgagcgcgtcacgccgcggctgtcccatgccaactcagccgtggtgttgtctgccgtg
aaggtgctcatgaagttcctggagctcctgcccaaggagtcggactactacaacacactg
ctgaagaagctgtccccacctctggtcaccctcctctccggggagcccgaggtgcagtac
gtggcactccggaacatcaacctcattgtgcagaaaaggcctgagatcttgaagcaggaa
atcaaggtgttctttgtcaagtacaatgatcccatctatgtgaagctggagaagttggac
atcatgattcgactggcctcccaggccaacattgcccaggtcctggctgagctgaaggag
tacgctaccgaggtggacgtagactttgtccgcaaggctgtgagggccattgggcgctgt
gccatcaaagtggagcaatctgctgagcgctgtgtgagcactctgctggacctcatccag
accaaggtcaactatgtggtacaggaggccattgttgtcatcagggacattttccgcaag
taccccaacaagtatgagagcatcatcgccaccctctgtgagaacctcgactccctggac
gagccagatgctcgtgctgccatgatctggatcgtgggcgagtacgccgagaggatcgac
aacgccgacgagctcctggagagcttcctggagggtttccatgacgagagtacacaggtg
cagctgactctgctgacagccattgtgaagctcttcctgaagaagccctcagagacgcag
gagctggtgcagcaggtcctcagcctggccacacaggactccgacaaccctgacctgcgc
gaccgtggttatatctactggcgtctcctgtccacggaccccgtgacggccaaggaggtg
gtgctctccgagaagccgctgatctccgaggagaccgacctgatcgagcccacgctgctg
gacgagctcatctgtcacatcggctcgctggcgtccgtctaccacaagccgcccaacgcc
tttgtggagggcagccacgggatccaccgcaaacacctgcccatccagcacggcagcatc
gacaccggcgagagcccagtgagcgccagccctgccgcccccattgaccagcctcaggtc
atcccctcacaaggcgacctccttggtgacctcctgaaccttgacctgggccccccagtc
aacgtgccccaggtgtcctccatgcagatgggggccgtggacctgctcggtggaggtctg
gacagtctgctcgggggagacctgggcggtggtgttgggggaagtcctgcagtgggccag
aacttcatcccttcgtccgtgcccaacacgttcgccccgtcgcccacccccgctcccatg
agcagtgggctgaacgacctgtttgagctctcgacgggcatggccatcaccacgggtgga
tacgtggctcccaaagccgtttggctcccggcagtgaaagctaagggccttgagatttcc
ggcaccttctcccgccgccagggccacatgtacatggacatgacgttcaccaacaaagcc
ctgcagcacatgaccgacttcgccatccagttcaacaaaaacagttttggagtcatcccc
accactccactggccgtgcacactcccctgatgcccagtcagagtatcgacatctccctg
cccctaaacactatcggccccgtcatgaagatggaccctctcaacaacctgcaggtggcc
gtgaagaacaacatcgacgtcttttacttcagcggcctcatccctctcagcgtcttcttc
gtagaggacggcaagatggagaggcaagtgttccttgccacatggaaagacatccccaac
gagaatgagctgcagtaccaaatcaaagaatgccacttaaacgcagacacagatactgtt
tcagggaaactgcagaacaataacatctacaccattgccaagcggaacgtggagggccaa
gacatgctctaccagtccctcaagctcaccaacgggatctggatcctggcggagcttcgc
atccaacctggcaaccccaactacacgctctccttgaagtgtcgggctccggaagtctcc
cagtatgtgtaccagatgtacgactctatcctgaagaactaa
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