Alosa sapidissima (American shad): 121708576
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Entry
121708576 CDS
T11137
Symbol
ttc8
Name
(RefSeq) tetratricopeptide repeat protein 8 isoform X1
KO
K16781
tetratricopeptide repeat protein 8
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
asad03037
]
121708576 (ttc8)
Cilium and associated proteins [BR:
asad03037
]
Primary cilia and associated proteins
BBSome
121708576 (ttc8)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_14
TPR_19
TPR_17
TPR_16
TPR_CcmH_CycH
TPR_10
TPR_11
TPR_9
TPR_MalT
PknG_TPR
ARM_TT21
TPR_15
ANAPC3
DUF5112
Motif
Other DBs
NCBI-GeneID:
121708576
NCBI-ProteinID:
XP_041947263
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All DBs
Position
5:complement(38700139..38731549)
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AA seq
515 aa
AA seq
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MEVTMDPLFLAWSYFRRRKFQKCSDICIKVLGDSPYDQESDSALPISEAAWSLKTRALTE
MVYIDEVDVDHEGIAEMMLDESSIAQVARPGTSLRLPGTSQGVGPSPAVRPMTQSGRPIT
GFVRPSTQSGRPGTMEQAIKTPRTAHTARPVTSSSGRFVRLGTASMLTNLDGPFINLSRL
NLTKYAQKPNMSKTLFEYIFHHENDVKNALDFAALATEHAQFKDWWWKVQLGKCYYRLGL
HREAEKQFRSALNHQEMVDTYLYLAKVYQRLDQPITALNLFKQGLDHFPGEATLLTGIAR
IHEEMNNITSATEYYKDVLKQDNTHVEAIACIGSNHFYTDQSEIALRFYRRLLQMGVYNC
QLYNNLGLCCFYAQQYDMTLSSFERALALVSSDEEQADVWYNLGHVAVGIGDLTLAYQCF
KLALAFNNDHAEAYNNLAVLELRKGRIEQSKAFLQTAASLAPHIYEPHYNLATLAEKIGD
LQSSYAAAQKAEDAFPEHVDTQQILKSLRQHFAEL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaccatggatccgttgtttctcgcttggagttattttaggagacgaaaattc
cagaaatgttcagacatttgcataaaggttctgggggacagtccatatgaccaggagtct
gattcggctctacctatctccgaggcagcatggagcttaaagacacgggccctgactgag
atggtatatatagatgaagtggatgtagatcatgaaggcattgctgaaatgatgctggat
gagagttccattgctcaagttgctaggccaggaacatctctgaggctgccagggacaagc
caaggagtaggccctagtccagctgtcaggcccatgacccagtctggtcgccctattact
ggctttgtgagacccagcacacagtcaggaaggccaggcactatggagcaagccatcaag
accccacgaactgcccacacagctcggccagtcacaagttcctctgggagatttgttaga
cttggaacggcatccatgctaaccaatctagatgggccatttattaacctgtctaggctc
aaccttacgaaatatgctcaaaaacccaatatgtccaagaccctgtttgaatatattttc
caccatgagaatgatgtaaaaaatgccctggattttgcggcccttgccactgagcatgct
cagtttaaggattggtggtggaaggtccaacttggtaaatgctactacaggctgggttta
catcgtgaagctgaaaaacagttccgatctgccctcaatcaccaggagatggttgacaca
tacttatacttagcaaaggtgtaccagcgcctagaccagcccataacagccctaaacctc
tttaaacaaggtcttgaccacttccctggagaggctacgctgctaacgggaattgcacgc
attcatgaagagatgaataacattacatctgccactgagtactataaagatgtcttaaaa
caggacaacacacatgtggaggccattgcctgcataggcagcaaccacttttacacagac
cagtctgagatcgccctgcgcttttacagacggctgttgcagatgggtgtatacaactgc
cagctgtataacaacctgggcctctgttgtttctatgcacaacagtacgacatgacgttg
tcgtcttttgaacgagctcttgcactagtgtccagtgatgaagagcaagctgacgtctgg
tacaacctgggccatgtggcagtgggaataggtgatttgacactagcatatcagtgtttc
aagctggctttagctttcaacaatgaccatgccgaggcttacaataatctggcagtgcta
gagctacgaaaaggtcgcattgagcagtccaaagctttccttcaaacggcagcatcactg
gcaccacatatctatgagccacactacaacttggcaactttagcagaaaagattggcgat
ctccagagcagctatgcagcagcccaaaaagctgaagacgccttccctgagcatgtggat
acccagcagatcctaaagagcctcaggcagcattttgcagaattgtga
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integrated database retrieval system
