Alosa sapidissima (American shad): 121708666
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Entry
121708666 CDS
T11137
Symbol
synj1
Name
(RefSeq) synaptojanin-1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad00562
Inositol phosphate metabolism
asad01100
Metabolic pathways
asad04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
121708666 (synj1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
121708666 (synj1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121708666 (synj1)
Enzymes [BR:
asad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
121708666 (synj1)
Membrane trafficking [BR:
asad04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
121708666 (synj1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121708666
NCBI-ProteinID:
XP_041947381
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Position
5:complement(34248861..34276147)
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AA seq
1727 aa
AA seq
DB search
MAFSKGYRIYHKLDPPPYSVIVETRNRDECLMFESGAVAVLSAAEKEAIKNTYTKMLDAY
GILGVLRLNLGDSMLHSLVVVTGCSSVGKVQDSEVFRVTATEFVSLKNDPSDEDRISDVR
KILSSGNFYFAWSSTGVSMDLSLNAHRRIKEDTTDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAGHKQAKACVISRLSSERAGTRFNVRGTNDDGQVANFVETEQVIFLD
DKVSSFIQIRGSIPLFWEQPGIQVGSHRVKLSRGFEANAPAFERHFTGVRGLYGKQVILN
LLGMKEGEHMLSKAFQSHLKASEHASTVRMINFDYHQMVKGGKAEKLHSVLKPQVSKFLE
ECGFFYYSGETGIQRCQTGTLRVNCLDCLDRTNSVQAFFALEMLPKQLEDMGLTEKPQLV
ARFQEVFRTMWSVNGDSVSKIYAGTGALDGKAKGGKLKDGARSVTRTIQNNFFDSSKQEA
IDVLRLGSTLNSDLADKARALLTTSSLYVSEPVLQSASPRVLLGMCQNYHKYTQPKQIRV
CVGTWNVNGGKQFRSIAYRNQTLNDWLLDAPMKAGHPEFQDGKAEPADIFAIGFEEMVEL
NAGNIVSASTTNQKLWAAELQKNLSRDCKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAV
DTVKTGMGGATGNKGGVAIRLLFHTTSMCFVCSHFAAGQSQVKERNDDYNEITRKLTFPM
GRLLYSHDYVFWCGDFNYRISMPNEEVKELIRQQNWDSLIAGDQLVDQKNAGLVFRGFIE
GKLDFAPTYKYDLFSEDYDTSEKCRTPAWTDRVLWKRRKWNFDKTAEEMNMNVVGAPSSE
EEDMTPWSPGTLKYYGRAELKTSDHRPVMAIIDVDVLEVDPEARHQVYKDVIALQGPPDG
TILVSLCTSGPDDYFDDALIDELLDKFAAFGEVILIRFVEEKMWVTFLEGYSALAALSLS
ASEVLGKIIDVRLKSPGWIKSLEDEMSVERVFGSIPTSASSTLLAEDSYVGEDEFDMEGD
VDEEVEEILPQHLQPGAGVGPGSSPLPSPRGSPCHSPTHGEPAAPSRPSRAPPRSTGQAQ
GSLSPVPFRRDLSGSPVDSAMGGPSSQGLEPKRAPPPRPNAPPARPAPPQRPPPPSGGRS
PIPGRRDSAGQKSPALSRADPAGRGQAAAGAVGRPNIPARAGVISVPPVARPPPPAHPGA
PRPAADVHPGAPRPAPDMHPGAPRPAPEAQSRPAQPPAGPPPAIPGPMRPQMAPPMQPQM
APPMQPQMAPPMQAQMAPPMQPQMAPPMQPQMAPPMQPQMATPMQPQMAPPMQPQASVQQ
RLPTPLLPSPMQPQSAAGGPQASSPVGPPPPQPGLASPKPPPRSRSSHTIPPESAQGPAP
APAPAPASQVNGLNGLQREAQWKPDPFDTLSSDLFPAPSSWLNTQSLTRSSSLRSGPLPP
PQPRSSSSATLPPASRSLHSAPLFSTASSSSPSSSPLQAPFSSSSSSSFSSASASPATWD
SSSGSTPSLLPPPPPVPSRSRSQETLSRVSPNPFLSEQPPAPSSSSSSSNPFTGGLALAH
TQRRSLTPDFSAQQQAQAASAFQRTMSAMSAFAPKQPAFPLTPLTPLTPIPIPAPAVAPP
APAPDTRKQQWVTFDDDSDFLLRGKASATAAAAAAPLLPLSTPSPASFTQAQMQPPASGL
GIENSWGSTSSSSSSTMSFPILPPPLPTRTNPNHPHIPTRTSEFTER
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atggccttcagcaaaggttaccgtatttaccacaaactggatccacccccctacagtgtc
atcgtggagacacgaaatcgcgatgagtgcttgatgtttgagtctggggctgttgcagtt
ttgtctgctgcagagaaagaggccatcaaaaacacatacaccaagatgctggatgcgtat
ggcattttgggagttctccgcctcaacttgggagactccatgctgcacagtcttgtggtg
gtgaccggttgtagctcagtggggaaagtccaagactccgaggtgttccgggtcacagcc
acggaatttgtgtccctgaagaatgacccgtccgatgaggaccgcatatcagacgttcgg
aagatcctcagctcggggaacttctacttcgcctggtcgtccactggggtcagcatggac
ctgagtctcaacgcccaccgcaggatcaaagaggacaccacagataatcgcttcttctgg
aaccaatccctccacctccacctgaaacactacggggtgaactgtgacgattggctcctg
cgtcttatgtgcggtggcgtggagatccgcaccatctacgcgggccacaagcaggccaag
gcctgtgtcatctccaggctgagctcagagcgggccggcacgcgcttcaatgtccgcggg
accaacgacgacggccaggtggccaactttgtcgagactgagcaggtcattttccttgat
gacaaagtgtcctcattcattcaaatccgtggctctataccactgttctgggaacagcct
ggcattcaggttggctctcaccgtgtcaagctgtctcgaggctttgaggcgaacgcacca
gctttcgagagacatttcactggagtgcgtggactctatggaaagcaagtgatcctcaac
ctcttggggatgaaggagggagagcacatgctgagcaaagccttccagagccatctgaaa
gcttctgaacatgcatccacagtgaggatgatcaacttcgactaccatcagatggtcaag
ggaggcaaagcagagaagctgcacagcgtgctcaagccccaggtcagcaagttcctggag
gaatgcggcttcttctactactctggagaaacaggcatccagagatgccagactgggacc
cttcgcgtcaactgtctggactgcttggaccgaaccaatagtgtccaggccttttttgca
ctagagatgctgcccaaacagctggaggacatggggctgacggagaagccgcagctggtg
gctcgcttccaggaggtctttcgcaccatgtggtccgtcaacggagactcggtcagcaag
atctacgccggtacaggagccctggatggcaaggctaaggggggaaagctgaaagacggc
gcccgctcggtcaccagaaccatccagaacaacttctttgacagctccaagcaggaggcc
attgacgtcctgcggctgggcagcaccctgaacagcgacctggccgacaaggcccgcgcc
ctgctcaccaccagcagcctttatgtctctgagcccgtattacaatcagcgtcaccaaga
gttttactgggcatgtgccagaactatcacaagtacacccagcccaagcagatcagggtg
tgcgtgggcacctggaacgtcaacggtggcaagcagttccgcagcatcgcatatcggaac
cagaccctcaatgactggctcctggacgcccccatgaaggcaggccacccagaattccaa
gatggcaaagctgagcctgcagacatctttgccattggctttgaggagatggtggagctg
aatgctggaaacatagtcagtgcaagcaccactaatcagaagctgtgggcggccgagctg
cagaagaacctctcccgcgattgcaaatatgtgctgctggcgtccgagcagctcgttgga
gtgtgtctgtttgtgttcatccgcccccaacacgccccgttcattcgggatgttgctgtg
gacacagtgaagaccggcatgggcggagctacaggcaacaaagggggcgtggccattcgc
ttgctgttccacaccaccagcatgtgctttgtgtgctcacattttgccgccggccaatca
caggtcaaggagaggaacgacgactacaatgagattacgcgcaagctcaccttcccaatg
ggtcgtctgctgtactcccatgactacgtgttctggtgcggagactttaactaccgcatc
agcatgcccaatgaggaggtcaaggagctgatccgccagcagaactgggactccctcatc
gctggagaccagctggtggaccagaagaacgctggtctggttttccgcggcttcattgag
gggaagttagactttgctcccacctacaaatacgacttgttctctgaggattatgacacc
agtgagaagtgccgcacgccggcctggaccgaccgagtgctgtggaaacgcaggaagtgg
aactttgacaagaccgctgaggagatgaatatgaatgtggtgggcgctccttcatctgaa
gaggaggatatgacgccctggagcccaggaacactcaagtactacggcagagctgaactc
aagacctctgatcacagacccgtgatggccatcatagacgtggacgtgctggaggtggac
ccggaggcgcgtcaccaggtctacaaggacgtgatcgcactgcagggtccccccgacggc
accatcctggtgtcgctctgcacctctggaccagacgactactttgacgacgcgctgatc
gacgagctgctcgacaagtttgccgccttcggcgaggtcattctcatcaggtttgttgag
gagaagatgtgggtcacgttcctggagggctactctgctctggccgcactgtcactcagt
gcgtctgaggtgttggggaagatcatagatgtgcgtctgaagagcccgggctggattaag
agcctggaggacgagatgagtgtggagagagtctttggcagcatccccacctcggccagc
tccacgctgctagcagaggactcctacgtgggagaggacgaattcgacatggagggtgac
gtggatgaggaagtggaggagatcctaccgcagcacctgcagcctggagcgggcgtcggc
cccggctcgtccccactgccctccccccgcggcagcccctgccactcgcccacccacggg
gagccggccgcccctagccgccccagtcgggcaccaccgcgctccactggacaagcacag
ggaagtttaagccccgtgcctttcaggagagatctgtcaggttctccagtggactctgca
atgggcggaccgtcgtctcagggtttggaacccaagcgggcccctcccccgaggcccaac
gcgcctccggctcgtccggcacccccacagcgcccaccaccgccctcaggcggtagaagt
cccatacctggtagaagggattcagcaggacaaaaaagccctgcattatcccgagccgac
cctgcagggcgcggccaggctgctgcaggagcagtcggacgaccgaatatcccagcgcgt
gcaggggtcatcagtgttccaccggtggccagacccccacccccggctcaccctggagct
ccgcgccccgcggctgacgtgcaccccggagccccacggccggcccccgacatgcacccc
ggagcgccgcgccccgcccccgaagcccagagcagaccagcgcagccgcccgccggtcca
cctcctgcaataccaggacctatgagaccccagatggcacctcccatgcaaccccagatg
gcgcctcccatgcaaccccagatggctccccccatgcaggcgcagatggcgcctcccatg
cagcctcagatggcgccccccatgcagcctcagatggcgcctcccatgcagcctcagatg
gcaacccctatgcagcctcagatggcgcctcccatgcaaccccaagcatcagtgcagcag
cgtctgccgacccctctcctgccctctccgatgcagccgcagtcggccgccggcggcccc
caggcatcttctccggtcggccccccgccaccccagccgggcctggcctcccccaagccc
ccgccgcgcagccgctcctcccacaccatccccccggagtcggcccagggcccagcccca
gccccagccccggctccagcctcacaggtcaacggactgaacggcctccagcgagaagca
caatggaaaccagaccccttcgacacgctgtcctccgacctcttccctgcgccctcctcc
tggctcaacacccagtccctgacccgcagcagctcgctgcgctccggcccactcccgccg
ccccagccccgctcctcgtcctcggccacgctgccccctgcctcccgctcgctgcactcg
gcgcccctcttctccaccgcgtcctcctcctcgccctcgtcgtcccccctgcaggcgccc
ttctcctcatcctcctcttcctccttctcctctgcctctgcgtccccggcgacgtgggac
tcgtcgtccggcagcacgccctccctcctgccgccgccgccaccggtgccgtcgcgcagc
cgctcgcaggagacgctgtcacgcgtctcccccaaccccttcctgagcgagcagcccccc
gcccccagcagcagcagcagcagcagcaaccccttcacgggcggcctggctctggcccac
acgcagcgccgctcgctcacgccagacttctccgcacagcagcaggctcaggccgcctcg
gccttccagaggaccatgtccgccatgtctgctttcgcccccaaacagcccgccttccca
ctgaccccactgacccccctcacgcccatccccatccctgcccctgctgtcgcccctcct
gcccctgccccagacacgcgcaagcagcagtgggtcacgttcgacgatgactcagacttc
ctgctcagagggaaggcctccgccacagcggcggcggccgcagcccccctacttcctctc
tccacgcccagcccagcgtcgtttacacaggcccaaatgcagcctcccgcctctggcctc
ggcatcgagaacagctggggctccacctcctcttcctcctcctccaccatgtcatttccc
atcctgccgccccccctccccaccaggactaacccaaaccacccacacatacccacacga
acgagcgagttcaccgagagatga
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