Alosa sapidissima (American shad): 121708684
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Entry
121708684 CDS
T11137
Symbol
alcama
Name
(RefSeq) CD166 antigen homolog A isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
121708684 (alcama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asad04515
]
121708684 (alcama)
04090 CD molecules [BR:
asad04090
]
121708684 (alcama)
Cell adhesion molecules [BR:
asad04515
]
Immunoglobulin superfamily
Other
121708684 (alcama)
CD molecules [BR:
asad04090
]
Proteins
121708684 (alcama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
C2-set_2
I-set
ig
V-set
Ig_PDGFR_d4
C1-set
Ig_4
Syndecan
Motif
Other DBs
NCBI-GeneID:
121708684
NCBI-ProteinID:
XP_041947426
LinkDB
All DBs
Position
5:complement(22636319..22675375)
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AA seq
564 aa
AA seq
DB search
MGSSSYLLRVFITAVMFLQAHSSIPTIVGLYGETIEVPCINGGAQPDGLMFTKWKYMKDD
NTAGDLLVKQAHKEEATIQASDGYRDRVSIAPNSSLLIAKGTLEDQRLFTCMQVWGGNVK
EYPVQVSVHKRPSPPQIKDKAKELENGKLTTLGTCIASDANPVAILTWTKDGQPLVPDDK
TIKITGQVTKDPSTGLSKASSLLQYTAGKEDVGSQFTCVATHPLVDQESAPETFTVHYPT
EKVNLQVINKGAIKEGDDVTLKCQADGNPPPTSFNFYLKDQKVPVMDNDTYTLRGVTRES
SGEYKCSLLDDEKKQDTQEIIVHYLDLSVSPSGRVLKNFGDTLVVMVDQNASVDAQISWT
KDNEKLEKEPVFGELTYSDAGLYVLEVSVAGIKKSHSFELDVQGKPSIKFLTEKLSSDGN
SKVLICVAEGSPEPNVQWSVNGTNEKTSYSSGKVTHEITVVPSKNLTVLCTVTNSLGDDS
RAIFLQSVIVEKKEPEGDTSTGNDQAKLIVGIVVGLILAAAIVGLIYWLYMKNSRQGSWK
TREKEMGTSEEEKKLEENNHKPDV
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgggttcatcttcgtacctcctgcgtgtcttcatcactgccgtaatgtttctgcaagcc
cacagcagtataccaacaattgttggcttgtatggagagactattgaagttccctgcatc
aatggaggagcccaacccgatggccttatgttcactaagtggaaatatatgaaagatgat
aacacggcgggagacctcctggtaaagcaagcacacaaggaggaggccaccatccaggcc
tcagatggctatagagacagggtgagcatcgcccccaactccagcctgctcattgccaag
ggaacgctggaggaccagaggctcttcacctgcatgcaagtatggggaggcaacgtgaag
gagtacccagtgcaagtttctgtccacaagaggccttcgccaccccagatcaaagataaa
gccaaagaactggaaaatggaaagcttaccacccttggcacatgcattgccagtgatgcc
aaccctgttgctatcttaacatggaccaaagatggccagccactggtccctgatgacaaa
acaattaagatcactggacaggtcacaaaggacccaagcactggcctgtccaaagcctcc
tctcttctgcagtacacggcgggcaaagaggacgtgggctcccagttcacctgcgtggcc
acccacccgctagtggaccaggagtcggctccagagactttcaccgtccactatcccaca
gagaaggtgaacctgcaggtaatcaataagggtgccattaaagaaggagatgatgtcacc
ctaaagtgccaagcagatggcaatcctccccccactagttttaacttctacctgaaggac
cagaaagtgcctgtgatggacaacgacacgtacaccctgcgcggtgtcacacgagagagc
agtggggagtacaagtgctctctgcttgatgacgagaagaaacaggacacgcaggaaatc
attgtacactacctggatctcagcgtcagcccctcggggagggtcctgaaaaactttggg
gacaccttggtggtgatggtggatcagaatgcctctgttgacgcccagatttcatggacc
aaggacaatgagaagctcgagaaggagccggttttcggagagctgacctattcagacgct
gggctgtatgtgctggaggtgtctgtggccggaattaagaaaagtcattcctttgagctg
gatgtccagggcaagccgtcgatcaagtttctgactgagaagctcagctcagatggaaac
tccaaagtcctgatctgtgtggccgaaggctcacctgagcccaatgtccagtggagtgtc
aatggcaccaatgaaaaaacatcttacagcagtggaaaggttactcacgagatcacagtg
gtgcctagcaagaatctcactgttctctgtactgtgacaaatagcctgggagacgactcc
agggctatcttcctgcagtccgtaattgtggagaaaaaagagccagaaggagacacgtcc
actggtaatgaccaggctaagctcattgtgggcattgtggttgggcttattctggctgct
gctattgtgggcctcatctattggctgtacatgaagaactccaggcaagggagctggaaa
accagagagaaggagatgggcacctctgaggaggagaagaagctggaggagaacaaccat
aagcctgatgtgtag
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