Alosa sapidissima (American shad): 121708898
Help
Entry
121708898 CDS
T11137
Symbol
ndst1b
Name
(RefSeq) bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1b
KO
K02576
heparan sulfate N-deacetylase/N-sulfotransferase NDST1 [EC:3.5.1.-
2.8.2.8
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
asad01100
Metabolic pathways
Module
asad_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
121708898 (ndst1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
asad01003
]
121708898 (ndst1b)
Enzymes [BR:
asad01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.8 [heparan sulfate]-glucosamine N-sulfotransferase
121708898 (ndst1b)
Glycosyltransferases [BR:
asad01003
]
Unclassified
Sulfotransferases
121708898 (ndst1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSNSD-CE
HSNSD_N
Sulfotransfer_1
Sulfotransfer_3
Motif
Other DBs
NCBI-GeneID:
121708898
NCBI-ProteinID:
XP_041947777
LinkDB
All DBs
Position
5:complement(30960758..31026098)
Genome browser
AA seq
897 aa
AA seq
DB search
MMLACSRVRRLYRQLTLQTSLLLLFLFCMVSVLVSAYFLYGAKRELEPAAGGGGAMADAL
EQGTDWDDLRAATPSASSRLLPARTARPADTSRTDPVVLVFVESLYSQLGQEIVAILESA
RFRYQTEIAPGKGDMPTLTDKNRGRFTLVIYENILKYVNLDAWNRELLDKYCVEYGVGII
GFFKANENSLQSAQLKGFPLFLHSNLGLRDCSINPKSPLLFITRAREVERGPLPGDDWTV
FQSNHSTYEPVLLARSRTAEVGAPPGLGGGGGSAGLLHAAVVQDLGLHDGIQRVLFGNNL
NFWLHKLVLVDAVSFLTGKRLSLGLERYVLVDIDDIFVGKEGTRMKVSDVKALLETQNEL
RSHVPNFTFNLGFSGKFFHAGTDEEDLGDDLLLSYSKEFWWFPHMWSHMQPHLFHNQSVL
AEQMLLNRRFAEEHGIPTNMGYAVAPHHSGVYPIHMQLYEAWKKVWGIKVTSTEEYPHLK
PARFRRGFAHSGISVLPRQTCGLFTHTIFYNEYPGGPKELDKLINGGELFLTVLLNPISI
FMTHLSNYGNDRLGLYTFKNLVKFLETWTNLKLQTLPPVPLAQRYFQIFPEERDPIWQDP
CEDKRHKDIWSKEKTCDRFPKLLIIGPQKTGTTALYLFLGMHPDLTSNYPSKETFEEIQF
FNGRNYHKGIDWYMEYFPLPSNTSSDFYFEKSANYFDSEVAARRAAALLPKAKIITILIN
PADRAYSWYQHQRAHDDPVAQRYTFHDVITAGHDAPARLQVLQNRCLVPGLYATHLQRWL
SHYHPSQILVLDGQMLRTEPAAVMDKIQKFLGLTNLLNYHKILAFDPKKGFWCQLMDGGK
TKCLGKSKGRRYPDMDADSRNFLRDQYREPNIELSKLLYKMGQPLPSWLREELLHIR
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgatgctggcgtgcagccgggtgcggcggctctaccgtcagctcacactgcagaccagc
ctcctcctgctcttcctcttctgcatggtcagcgtcctggtgtcggcctacttcctgtac
ggcgccaagcgggagctggaacccgcggcgggcggtggcggggcgatggcggacgccttg
gaacagggcaccgactgggacgacctacgggccgccacgccgtcggcctcgtcgcggctg
ctgcccgcccgcactgcccggccggcggacacgtcgcgcaccgaccctgtggtgctggtg
ttcgtcgagagcctctactcgcagctgggccaagagatagtggccatcctggagtcggcc
cgcttccgctaccagacggagatcgcgccgggcaaaggggacatgcccacgctgacggac
aagaaccggggccgcttcacgctagtgatctatgagaacatcctgaagtacgtcaacctg
gacgcctggaaccgtgagctactggacaaatactgtgtggagtacggcgtgggaatcatc
ggcttcttcaaggccaacgagaatagtctccagagtgcgcaattgaaaggcttcccgctg
ttcctgcactccaacctgggcctgcgcgactgcagcatcaaccccaagtcgcccttgcta
ttcatcacgagagcacgtgaggttgaacgaggcccgctgcccggcgacgattggaccgtc
ttccagtccaaccactccacttatgagcccgtgctactagcgcgtagtcggaccgcggag
gttggcgcccccccggggctgggcggtggcggtggcagcgccggtctcctccacgcggcc
gtggttcaggatctgggcctccacgacggcatccagcgggtgctctttggaaacaacctc
aacttctggctgcacaagctggtgctggtggatgctgtgtccttcctgacgggcaagcga
ctgtcgctcgggctggagcgctacgtgctggtggacatcgacgacatttttgtgggcaag
gagggcacccgcatgaaggtgtctgatgttaaggctctactggaaacccaaaatgagctg
cgttctcacgtccccaacttcacctttaaccttggcttctcagggaagtttttccatgct
ggtactgatgaggaggatctgggagacgacctgcttctctcctacagcaaagagttctgg
tggtttcctcacatgtggagccacatgcagcctcatctcttccacaaccagtcggtgctc
gccgaacagatgctgctcaaccgccgcttcgctgaggagcacggcatccccactaacatg
ggctacgcagtggcgccgcatcactccggggtctaccccatccacatgcagctgtacgag
gcctggaagaaggtgtggggcatcaaggtgaccagcacagaggagtacccccacctgaag
cctgcccgcttccgacggggcttcgcacacagtggcatcagcgttttgccccgccagact
tgtggtctcttcactcatacgatcttctataacgagtatcccggagggcccaaagaactg
gataaactcatcaacggaggagagctcttcctcactgtgctcctaaaccctatcagcatc
ttcatgacccacctgtcgaactacgggaatgaccggctaggcttgtacactttcaagaac
ctggtgaagtttctggagacatggaccaacctgaagctccagacgctgccgccggtgcca
ctggcccagcgctatttccagatctttcctgaggagagagaccccatctggcaggacccc
tgtgaggacaaaaggcacaaagacatttggtcaaaagagaagacatgtgaccgcttcccc
aagctgctcattatcggcccacagaagacaggcactactgcactctatctcttcctgggt
atgcaccctgacctgaccagtaactaccccagcaaggagacctttgaggagatccagttc
ttcaatgggcgcaactaccacaaaggcatcgactggtacatggagtacttccctctcccc
tccaacaccagctcggacttctacttcgagaagagcgccaactactttgactcggaagtg
gcggcgcgccgagccgcagctctgttgcccaaagccaaaatcatcaccatcctcatcaac
cctgcggaccgggcctactcctggtaccagcaccagcgggcacacgatgacccagttgcg
cagaggtacaccttccatgatgtcatcacagctggacacgacgccccagccaggctgcag
gtgctgcagaaccgctgcctggtgccgggcctctacgcaacccatctgcagcgctggctc
agccactaccaccccagccagatcctggtgttggacgggcagatgctccggaccgagcct
gcggcagtcatggacaagatccagaagttcctcgggctcacaaacctcctcaactatcac
aagatcctcgcgttcgatccgaagaaagggttctggtgtcagctgatggacgggggaaag
accaaatgcctgggcaagagtaagggccgcagatacccggacatggatgcagattctcgt
aacttcctgcgggaccagtaccgggagcccaacatcgagctgtccaagctgctctacaag
atgggacagcccctgcccagctggctccgagaggaactgctccacatcaggtag
DBGET
integrated database retrieval system
