Alosa sapidissima (American shad): 121709001
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Entry
121709001 CDS
T11137
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121709001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121709001
Membrane trafficking [BR:
asad04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121709001
Endosome - Golgi transport
Arf GTPase associated proteins
121709001
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121709001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
RhoGAP
PH
PH_6
Motif
Other DBs
NCBI-GeneID:
121709001
NCBI-ProteinID:
XP_041947935
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All DBs
Position
5:30705975..30717678
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AA seq
1054 aa
AA seq
DB search
MSSNINQATFPPVPKPRARYKLKVGLQRQSAYLDSDSVWYDSEAPSTQVVSNEENAEPLT
VPSTDVPGELHIGQSQQQLQENLDQSSVATPTSPTCPTSTDVPGELPIGRSQQQLQENLD
QSSVATPTSPTCPTLPTCPPSPPLSPVGAAETEPTAAVSDSSNDEEAEVPMTPDSLKSDE
EVISGDAGEIDASLEPTYISVVPNGRGSIFNFGMTTEPTLKEAEKTIEAQLQKQKTPRMA
TIRVSRKKQGRAGLAKDTQPAESRHKGTVVSRSSWLDVWKGRKHNVLWATLDGQLMSLWK
KRTDKFTEYVFHVSSITAVSSQGKGRFSIYFGKKHFEFMAHDEAVQEGWVSSLHATRGIV
PLPPPDHQSSLIMKDPRTKVYAAICGHSLWIYNKKEDFNLGIGMTCVSMNVASVKQTGKR
GFSLISPYKTFNFSTDSSRELTTWLNCLNQGIISALSCSEVAQRLWASPWNKVCADCGSA
SPEWASINLLLVICEDCAGQHRALGANKSKVRSLKLDSKVWTESLIELFVAYGNKAANDV
WGYNIPAAEQILPNATSSEREAFIKAKYIRGLYRRSHPLTSNRDLLDQRLCQVVCGPDVS
ETLSLICSGARVLCKTVDGPIALAEQAGQALQVELLRHNEFLEVPNYDHQVPSKDNSGLE
ELHGKLQDERLLFSQENDSAACDVLDLREVIAVYDRSEGSTYEFDMLTLTDKLVCNANTL
DSLLSHLLHILKVVLPCTVEDAEVTGIFAASRVSVREGNGLQHTEAWVALRDGEALFFPT
DPQKPKERLTLSTVQRYDHNSTEHTIEMALGERTVSLRFEKQSSCTSWYTLLQRAVLSPA
RESQSQPSLTQLHTVCDTVPPAVERCIFHINTHGLKVEGLYRRCGVATKTSHLVQTLSSS
ASAAVLETDEQGILDTCSALKQLLRRQPDLIPQNKKPQWVKAAAGPHEALRLQSYCRLMR
QLPLESRAMLEALCGHLYLVQVHSQENRMTAQNLALVFVPTLFQELAMSTDMVRLTRELI
IHHTLIFQKSIEMSEEEAGTDQVDGEQEEIITVF
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaaacatcaatcaagccactttcccacctgttcccaaacctcgtgcacgatat
aaattaaaagtgggactacaaagacagtcagcatatctagacagtgattctgtgtggtat
gattcagaggcaccatcaacacaagttgtgtccaatgaggagaatgctgagccgctcact
gtcccctccacggatgtgccaggtgaactgcatatcggtcaaagccagcagcagctccaa
gagaacttggaccagagctctgtggcaactccgacctcaccgacctgtccgacctccacg
gatgtgccaggtgaactgcctatcggtcgaagtcagcagcagctccaagagaacttggac
cagagctctgtggcaactccgacctcaccgacctgtccgaccttaccgacatgtcctcct
tcacctccactcagtcctgttggggctgctgagactgaacctacggcagcagtgtcagac
tcctccaacgacgaggaggcagaggtaccaatgaccccggactccctgaagtcagatgag
gaggttatcagtggggatgcaggagagattgacgcctccctagaacccacttacatatcc
gttgttcctaatggccggggcagcatatttaactttgggatgaccacagagccaaccttg
aaggaagcagaaaaaaccatagaagctcagcttcagaaacagaaaacaccacggatggcc
actattcgcgtgagcagaaaaaagcaagggcgtgctgggctagcaaaagacacccagcca
gcagagtctcgacacaaagggaccgttgtgtctcggtccagctggctggacgtatggaag
ggaagaaagcataacgtgttatgggcaactctggatggacagcttatgtcattgtggaaa
aagcgcacagataagttcacggagtatgtgtttcatgtgtcgagcatcaccgctgtcagc
agtcaaggaaagggtcgcttctcaatctactttggcaaaaagcactttgaattcatggca
cacgacgaagctgtgcaggagggctgggtctcctctctccatgccacgcggggaatagtg
cctctgcccccacctgaccatcagagctctctgatcatgaaggacccacgcaccaaggtg
tatgctgccatctgtggccacagcctgtggatctacaacaaaaaagaggactttaacttg
gggataggcatgacctgtgtgtccatgaatgtggcctcagtcaagcagacaggcaaacgt
ggtttcagcctcatcagcccatacaagactttcaacttctccacagattcgtctcgagag
ttgacaacatggctcaactgcctgaaccagggcatcatcagtgccctgtcctgcagtgag
gtagcccagcgcctgtgggccagcccctggaacaaagtgtgcgcagactgtggcagtgcc
agcccagagtgggcctccatcaacctgctgctggtcatctgtgaagactgcgctggccag
cacagagccttgggagcaaacaagtccaaagtgcgcagtctgaagcttgacagtaaggtg
tggacagaatccctaatagagctctttgtagcgtatggaaacaaagcagccaatgatgtt
tggggttacaacatacctgctgctgagcagattctgcccaacgcaacttccagtgaaaga
gaagctttcatcaaagccaaatacatcagaggtctttaccggagatcccacccattgacc
tccaacagagatctcctcgaccagagactttgccaggtggtgtgtgggccagatgtgtcg
gagactctgtcgcttatctgctctggggcacgggtgctctgcaagactgttgacgggcct
attgccctggcagagcaggctgggcaagctttacaggtggagcttctgaggcataatgag
tttttggaggttcccaactatgaccatcaagtgccttccaaggataattcaggtctggag
gagctgcacgggaagcttcaggacgagcgcctcctgttctcccaggagaatgactcagca
gcctgcgatgtcttggacctgagggaggtcatcgccgtctatgaccgatccgaggggtca
acgtatgagtttgacatgttgactctgacagataagcttgtctgtaatgcaaacacattg
gatagtctcctcagtcaccttcttcacatactaaaggtggtgctcccatgcactgtggag
gatgcggaggtgacggggatctttgcggcgtccagggtgtcagtgcgtgaggggaacggc
ctgcagcacacggaggcctgggttgccctcagagatggcgaggcgctcttctttcccaca
gatcctcagaaacccaaggagaggctcacgctgtccacagtccagcgctacgaccataat
tccactgagcacacaatcgagatggctctcggggagaggacggtgtcactgcggtttgag
aaacagagtagctgcaccagctggtatactctcttgcagagggccgtcctgtcccctgcg
agagagagccaaagccaaccctcgctcactcagctccacactgtttgtgacacagtgccc
ccagccgtcgagaggtgcatcttccacatcaatacacacggtctgaaggtggaaggcctg
tacaggcgctgcggtgttgccactaagaccagtcacctggtgcagactctgagcagctct
gccagtgctgctgtgctggagacggacgagcagggcattctggacacttgcagcgccctc
aaacagttgctccgccggcagcccgatctcatcccccagaacaagaaaccccagtgggtc
aaagcagcagctgggcctcatgaggctctcaggctgcagtcctactgtcggctgatgagg
cagcttcccttggagagcagggccatgctggaggctctgtgcggacacctctacctggtt
caggtgcacagccaggagaaccggatgacggcccagaacctggccctggtgttcgttccc
acgctcttccaggagctggccatgagcacggacatggtgcgcctcaccagagaactcatc
atccaccacaccctcatcttccagaagagcattgagatgtctgaagaggaggccgggaca
gaccaagtagacggagaacaggaggaaatcatcaccgtcttctga
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