Alosa sapidissima (American shad): 121709154
Help
Entry
121709154 CDS
T11137
Name
(RefSeq) beta/gamma crystallin domain-containing protein 3 isoform X1
KO
K25509
beta/gamma crystallin domain-containing protein
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121709154
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
121709154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Crystall
Ricin_B_lectin
RicinB_lectin_2
PMR5N
Motif
Other DBs
NCBI-GeneID:
121709154
NCBI-ProteinID:
XP_041948227
LinkDB
All DBs
Position
5:22447813..22475304
Genome browser
AA seq
1731 aa
AA seq
DB search
MCGQRPGHVKEPRNQQMQSSQLITTHTLRACFSLFNILMNFLPQRLGSEEISHGAIVLCS
HCSHCIMAQLHTIVPDSALRSICFSGEAFQGCEGEEGTDRHNRDTQANVLDNEAGSLSEL
PDRQPPLGLTKSPGPSSPVPPSDSFLKRLGSLFHFFSKAEARAPQLEQDSALLPGPGGVT
CEVARTQHISETTGELPGGDVWGPQCQEMDKAPTEQDHSAYMAEETATEAQSGPMGQTPE
SLPCVAEDHGPTWSQAGDHVTLTGNNDEGQQQQAFDGPAVITHTTYRGQKEVRKTRRRQP
VQIYSPISESDESHPCRGVSSEGVGSPVSLTGDLQQHSEAAVELPGVSSEQYEVLDSQEA
HSEPPSQAAYVQLADAHGAACTHKAKDTLSRYQGCQESPSLCVSAPGIRNCEVNDCSLYT
NKSLDVQLSEVDCNKGTGESAVKPHLPLDEDILQCESKAMVDIILKNALTALQKIETSEQ
ENAIPHEADVEREPFTYAGARHGYQKEDYDFKYATQELEDKHVMPTHVDDQVISRAQGEG
SRSTFSSGYESIAGSDTDIRCSPGQSFEGSPLALPTSGLHVESLSMAMPGIADSYEEKLT
GDSESENTDCEKYDNESIDVIRNITFKMEDGETEGCVAFEPKPEEFGTLTFEGYSNSCLM
SEPEVEDVDKEIRPKPCQNSEQSVQFQPVSHCTFQSGSVNADNDSLVDFKLNTLIEHTEV
GNMYPESFSLACKPGEKVQSQEVVRPKPLPIAQHSLASHDFKDKAVVEPTSFSNTESRPE
RSTVTPHQCVMSEDQCQNSELYVGATVSDAKESCATFTAQDGLNAQDKNVDFAQLASSIS
LLVSGPQPVLCSGFPIVRGEEQEEEEEMDAIFVNDTGPMEKPTTRRGKTYPFSLSPIFEE
EESLQVPPEEDLKSADQQTCSILSLLQSVSERLQSSGFTDGDPETWADSMDAFRCSRWGS
LSDREDGDEENPPADQDLTLKDEAEMLGRVEETVSTVPHEAPEEKDCVDGTPSKHKRIAS
SPYYECLKSKPPSILPVGSITDGKLSKPLVRGEQLSLRRIMPRPSVMHIYDGMTFSGEKR
IILGDVVDTWGMTFKTGVSIRVLTGCWLLYVEPGFKGSCVVLEEGEKVLTGGEGEVQEQS
TNKVKSPDQVSIGSIRRIVKDDRIPEIHCHGEGESPVVFHSRTENLEAVQLFNLTVKSGC
WLAYEQNGFSGNFAVLETGGKTTHGSGSLVTHARSLRPLTRGGPKVSRPLDPKMMLYELP
HFQGQCRELGTNASRVEGLQRVSSLRVISGIWVGYSREHYRGQQCLLEEGECTDCRQLGG
SDRTFLSFRFLLADCIEPAISLRNAHSPETAHMDIVDLDVPDMEKSGPNLAPASICVKSG
VWVGYSGKFFSGDQYILEKGQHSGPLDWGDCSGEVMSIRPLRLSCGNREPKHLIRAYSEP
HFCGEHREYQSKATDCSSPYPMSFRVIHGSWVLFDEEGCSGNQFILTEGLFPDLTSCGNG
VSAIKSLQPVPYCFSDPSISLFSLDSFEGLEMEAVMTMDDMEGFFTQSLRVHSGLWVVYE
YSHFKGRQMLLKTGEYSMWGEHSGWDTIGSLHPLGQPKAYVQLRNRALGSVLTAEPTQDG
NAPAKVSLKAPKSLDCQQWIFTDGLLKCKVGKACMSVIGGKAHVGARVALWPEHGRAHQR
WSLNENGTVSSHLNHSLVLDIRGGNGIDRDHFIVNQFSADRSTQFWDIELV
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggacaacgacctggacatgtcaaagagccaaggaaccagcaaatgcaatcatca
caactcattacaacacatacactcagagcttgtttctccctcttcaacatcctgatgaat
ttcctaccacagaggttagggagtgaagagatatcacacggtgccattgtgttgtgcagc
cactgtagtcattgtatcatggcacagctgcacaccatagtgcctgactcggctctgagg
tctatctgtttcagtggagaggcattccagggctgtgaaggagaagaaggaacagatcgt
cacaatcgggacacccaggcaaatgtgctggacaatgaggctggctcattgtcggaactc
cctgacaggcagcctcctcttggccttaccaaatccccggggcccagctcacccgtgccc
ccctcagattcttttctcaaaagacttgggagtttgttccacttcttctccaaggcagag
gcgagagcaccacagcttgagcaagattcagctctgctgccagggcctggaggagtaaca
tgcgaagtagccaggacccagcacatcagtgagacgaccggtgagctgcctgggggggac
gtctggggcccccagtgtcaggagatggacaaagcacctaccgagcaggatcactctgct
tatatggcagaggagacagccaccgaggcacaatctggaccaatgggccagacaccagag
agtttaccgtgtgtggctgaagatcacgggccaacatggagccaggctggagaccatgtg
actttgacaggaaacaatgacgagggtcagcagcagcaggccttcgatggtccagccgtc
atcacgcacacgacctacagaggccagaaggaggtccgaaagacgcggaggaggcaaccc
gtgcagatctactcgcccatctcggagagtgatgagagccatccctgtagaggagtgtcc
agtgagggtgtaggaagccctgtttcactcactggtgacctccagcagcacagcgaagcc
gctgtggaactcccaggcgtttcctcagagcagtatgaggtcttggactcacaggaggca
cattcagagccaccttcacaggctgcgtatgtccagctagctgatgcccatggtgctgcc
tgcacacacaaggctaaggatactctttctaggtatcaaggttgccaagagtccccatca
ctttgcgtgtcagcacctggcattaggaactgtgaggtgaatgattgttccttgtacaca
aacaagagcctggacgtacagttatctgaggtggattgtaataaaggtacaggtgaaagt
gcagtgaagccacatctgcctctggatgaggatatcttacagtgtgaatcaaaagctatg
gtcgatatcatactgaagaatgcactgactgcactgcagaaaatagagacatctgaacaa
gagaatgccattcctcatgaggctgatgttgagcgtgaaccctttacatatgcaggagct
agacatggataccagaaagaagattatgattttaaatatgctacacaagaactagaggat
aagcatgtcatgcccactcatgtagatgaccaagtcatctctagagcacagggggaaggt
agcaggtcaactttttcatcaggctatgagtccattgcagggtcagacacagatattcgg
tgtagccctggtcagagctttgaaggaagtcctctagctcttccgaccagcggccttcat
gttgagtctctttctatggcgatgcctggaattgcagactcttacgaagagaagttaaca
ggggatagtgaatctgaaaacacagactgtgaaaagtatgacaatgaaagtattgatgta
ataagaaacataacatttaaaatggaagatggagagactgaaggttgtgtagcatttgaa
cctaagccagaggagtttggaactctgacatttgaggggtattctaactcttgccttatg
agtgaacctgaagtggaagatgttgataaagaaatcagaccaaagccctgtcaaaattca
gagcagtccgtacaatttcaacctgtttcacattgcacttttcagagtggatccgttaat
gcagacaatgatagccttgtagactttaaattaaacactttaattgagcatacagaggta
ggaaacatgtatccagaatcttttagtttagcatgtaagcctggggagaaggttcagagt
caagaagttgtgagaccaaagcccttgccaattgcacagcactcattagcaagccatgat
tttaaagacaaggcagtggtggagcccactagtttcagcaacactgagtcgaggccagag
aggagtacagtgacgccccaccagtgtgtcatgtctgaagaccagtgccagaattctgaa
ctctatgttggagccacagtgtcagatgctaaagagagttgtgcaacattcacagcacag
gacggattaaatgctcaggacaaaaatgtggattttgctcaattagccagctcaatcagt
ttgttggtctcgggacctcagcctgtcctctgttcaggctttcccatcgtccgtggcgag
gaacaggaggaggaggaggaaatggatgccatatttgttaatgacactggacccatggag
aagcccactacccggagaggaaaaacctatcctttctccctctctcccatatttgaggaa
gaggagagcctccaggtgccaccggaggaggatctaaaaagtgctgaccagcagacctgc
tccatactgtccctcctgcagtcagtgagtgagcgccttcagtccagcggcttcactgac
ggtgaccctgagacatgggcggactccatggatgctttccgctgctctcgctggggaagc
ctttctgacagagaggacggagatgaggagaaccctcccgctgatcaggatcttactcta
aaggatgaggctgagatgctcggccgtgtggaggaaacagttagtacagtaccacatgag
gcacctgaagaaaaggactgcgtggacggtaccccgtccaaacataaacggattgctagc
agcccgtactatgagtgtctgaagtccaagccaccatcgatccttccagtgggaagtatt
actgatggaaaactgtcaaaaccattagtcaggggggaacagttaagccttagaaggatc
atgccaagaccctctgtgatgcatatctatgatggtatgacattctctggagagaagcga
attatattaggcgatgtggtggacacttggggaatgactttcaagaccggagtctctata
cgagtgctgacaggatgctggctgctgtatgttgagccggggttcaaggggtcctgcgtg
gtcctggaggaaggggaaaaggtgctgaccggtggagagggggaggtgcaggaacaaagt
acaaacaaagtcaagtctccagaccaagtctccatcggatctattagaagaatagttaag
gatgatcgtattccagaaatccactgtcatggagagggtgaatccccagttgtctttcat
tctcggactgagaatttggaggctgtccagttatttaatctcactgtcaagtctggatgc
tggctggcatatgaacagaatgggttcagtggtaattttgctgttttggaaactggagga
aaaacaacacatggatctgggtcactggtcacacatgcgaggtccctgcgtcccctcacg
aggggaggacctaaagtctcaagaccgctggatcccaagatgatgctgtatgagctcccc
catttccaaggccagtgcagagagcttggaacaaacgcgtccagggtggaggggctgcag
agagtctcctctctgcgagtcatcagcggaatatgggtgggatactccagagaacactac
agaggccagcagtgtttgttggaggagggtgaatgtactgactgtcgacagcttggcggc
tcggatcgcactttcctctctttccgctttctgctggcagattgtattgaaccagccatc
tcattgaggaatgctcactctcctgagactgctcatatggacatagttgacctagatgtt
ccggatatggagaagagtggccctaaccttgcacccgcttccatttgtgtcaagagtgga
gtgtgggttggatacagtgggaagttcttctctggagaccagtacattctggaaaagggc
caacattctggtcctctggactggggcgactgcagtggtgaagtcatgtcgatcaggccg
ctccgtttgtcttgtgggaacagagaaccaaagcatttgatccgtgcttacagtgagcct
cacttctgtggtgaacatcgagagtaccagtctaaagcaactgactgcagctctccctat
cccatgtcattcagggtgatccatggaagttgggtgctttttgatgaagagggctgctct
ggaaaccagtttatcctgacggaggggctttttcccgacctaacttcatgtggcaatggg
gtatcagccatcaagtcactccagccagttccatattgtttttcagatccatccattagt
ctgttctccctggactcctttgaaggcttggagatggaggcagttatgactatggatgac
atggaaggctttttcactcaatctcttcgggtccatagtggactatgggtggtgtatgaa
tatagtcattttaaaggccgtcagatgcttctaaagactggtgaatactccatgtggggt
gaacacagtggctgggacaccattggctctcttcaccctctaggacagccaaaagcttat
gttcagttgcggaaccgggccctgggctcagtgttgactgcagaacccacacaggatggt
aacgctccagccaaagtgtccctaaaagcgcccaagtcattggactgtcagcagtggatt
tttaccgatggtctcctcaaatgcaaggtggggaaggcgtgcatgtctgtgattggtggg
aaggcacatgtaggagcccgcgtagccctgtggccagagcatgggcgcgctcaccagagg
tggagcctcaacgaaaatgggaccgtttcctcacatctgaaccacagccttgtactggac
attagaggtggcaatggcatcgacagggaccacttcattgtcaatcagttttcagctgat
cggtctacacagttctgggacattgagttggtgtag
DBGET
integrated database retrieval system
