Alosa sapidissima (American shad): 121709162
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Entry
121709162 CDS
T11137
Symbol
msx2b
Name
(RefSeq) homeobox protein MSH-D
KO
K09341
homeobox protein MSX
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121709162 (msx2b)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
121709162 (msx2b)
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
121709162
NCBI-ProteinID:
XP_041948240
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Position
5:13142961..13145108
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AA seq
249 aa
AA seq
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MSSPTDLRDSGSPEAVSRDRAMEERKAQVSSHPFSVESLMSGCKSHKESPAKAEDASWNN
FVRTHSVLYPGRDTCSPEGMRTHITPTSPVKLESPESEDDCSSWAANSKFSSQQRVSAAC
LLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLTLTETQVKIWFQNRR
AKAKRLQEAELEKLKMSSKPPLPPAFGLPFPLSAMSLYGQTYPYHRPLVPLAPTALYGTP
LGYSMYPLS
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccccgactgatctacgggacagtggttcacccgaagcagtgagtcgagaccga
gcgatggaggagcgcaaagcccaagtatcaagtcacccattcagcgtggaatcgctaatg
tcaggctgtaagagtcacaaggagtcgccagctaaagcagaggacgcatcgtggaacaat
tttgtacggacacattccgttctgtatcccggtagagacacgtgcagtccggagggaatg
agaacgcacatcactccaacttcaccggtcaaactcgagtcgccggagtcggaagacgat
tgcagttcttgggcagcaaactccaaattctcatcacagcaacgcgtgagtgctgcctgt
ctgctgcgaaagcacaagaccaaccgcaaacctcgcacacccttcactacctcgcagctg
ctggccctggagagaaagttccggcagaagcagtacctgtccatcgccgagcgggccgag
ttctccagctcgctcacgctcaccgagacccaggtgaagatctggttccagaaccgacgg
gccaaggccaagagactgcaagaggccgagctggagaagctcaagatgagctccaagccc
ccgttgcccccagccttcggcctgcctttccccctcagtgctatgtctctgtatggacag
acgtacccctatcacaggcccctggtgcccctggcccccaccgcactctacggcacgcca
ctaggctacagcatgtaccccctctcttga
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