Alosa sapidissima (American shad): 121709193
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Entry
121709193 CDS
T11137
Symbol
sptbn4a
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04517
IgSF CAM signaling
asad04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121709193 (sptbn4a)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121709193 (sptbn4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121709193 (sptbn4a)
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121709193 (sptbn4a)
Intermediate filaments
Intermediate filament-binding proteins
121709193 (sptbn4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
Xre_MbcA_ParS_C
Motif
Other DBs
NCBI-GeneID:
121709193
NCBI-ProteinID:
XP_041948312
LinkDB
All DBs
Position
5
Genome browser
AA seq
1396 aa
AA seq
DB search
MLMARDGARDEAQKLHRKWMKHQAFMAELARNKEWLAKIEQEGKELIQEQPELQSVVQQK
LEEMRECWTHLESTTKAKARQLFETQNHRTLSNDPPTKTLTDLDQQLSLLQEQPPAVASA
AGAVVTAASSTTTQPTLLQPRPTFSQQLQRIQTMESQLYRGVGMSQLGGSMSDVGVGVGA
GELQAGLLRMVEGEERPAETRICRLIEPLKERRRILLASKEMHQVSQDLEDEIVWIQERL
PLASSKEYGNNLQSVQQLMKTNEVLQMDLQSRRDRLEEVLERAGAVAALRTPEAELVREG
AEHARQLWEVLLVEAERRTVMLDAVFHAQQYYTQAAKADSWLSGQKLQVINEERGTDEPS
TLRLLKEQLALEQTVENYAETVSFLSQQCRRMLELGHPDSEHITKQQSHIDRLYVSLKDL
VEQRKTKLEQQYWLYQLKREVEGLEKWIAEREAVASSTEMGQDLEHVTVLQENFTKFTTE
TRAAGQRQMESVNKMVNEMIDCGHVDAATIAEWKDGLNESWADLQELMETRSQMLAASHQ
LHKFFTDGQEVLVQIEGKMRQLPEVRSCQVSTANPGTLQRLLHSFEHALQLLVTQVRQLQ
ENAAQLRAIYAGEKADAILAREQEVMQAWRELLVSCEGSRVQVTTVTDKVQFFALVRELS
MWTDGIMGQIGPHPDSARDVSGVETMMSQHQNLKAKMEAKSKVFTQCVEMGRMLLAARNP
ASEEVKEKLDHVMAKQKDLNDRWDQHWEKLQHTQQRLQEAQRIQAEKAWLTSKEPMISPA
SPREMMGGTGGADEVEQLIRRHEAFRKAAATWKEHFSSLRQVEKLKEEKSRQSSSSSLLN
RQMFPLSCLVGSSSSSSSSSTPFRQSLQDQLDIKSGPDVPQLAAHSLAQRLGTLASYSPV
MNGSSYHGLNPQAGVGMSDNPGYHVLVQQAGQLGVDSSSYHGLNQQGMMGVDSSSYQGLN
NPGMGGAAAGMMPEPKMAYAWQHLKTDCMQPKLNHIHKAVPALLEAHHAQQQQQQQQGHP
VGEIHPGIGIDSLELLHGRLQRDPRGSRSDPQMDHLRREREYRLGRQTSSEQEIQARLNE
LPMIVRQERYRRRLERQSSSEQEQASGQASGQASGKPSDQESATSDKRPGDKRSTMAEIV
EQVQEREAAQARGEVYRPPSVLSAPCGRLDRPRARDRPKPRRRPRPKEPEETTRRSRSAP
AQSALAVPAIPSHTVQVEGFLYRKHEPEGKEKSPNSKSWVNLYCVLTKGEIGFYKDARHT
TTPYNDEPLLNLNTCTCDSTNGYKKKKNAFILKVPNSDDYIFLAKDEEEFKKWVSSINAS
LKEHEDIIKWEKPTTSSTDPDKSELNVRSEGADRSEGADRSERGDGSEKADGSEKVDTSE
RVEGRDPGSSTSGRSK
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgctcatggcgcgggacggcgcgcgagatgaggcccagaagctgcaccgcaagtggatg
aagcaccaggccttcatggccgagctggcgcgcaacaaagagtggctggccaagatcgag
caggagggtaaggagctgatccaggagcagccagagctgcagtcggtggtgcagcagaag
ctggaggagatgcgcgagtgctggacccacctggagagcaccaccaaggccaaggcccgg
cagctctttgagacgcagaaccaccggaccctcagcaacgacccgcccaccaagaccctg
acggacctggaccagcagctgtccctgttgcaggagcagcccccggcggtggcctctgcc
gctggcgccgtcgtcaccgccgcctcctccaccaccacccagcccaccctgctgcagccc
aggcccaccttcagccagcagctccagaggatacagaccatggagtcgcagttgtaccgc
ggagtgggcatgtctcagctggggggcagcatgtcggacgtgggcgtgggcgtaggcgct
ggcgagctgcaggcgggcctgctgaggatggtggaaggagaggagcggccagccgagaca
cgcatctgccgcctcatcgagccgctcaaggagaggcgccgcatcctgctggcctccaag
gagatgcaccaagtcagccaggacctggaggacgagattgtgtggatccaggagagactc
cctctggcatcctccaaggaatacggaaacaacctgcagagtgtgcaacagctgatgaag
acaaatgaggtgctgcagatggatctgcagagccggagagaccgattggaggaggttctg
gagagggcgggagcagtggcggcactacgcaccccggaggcagaactggtgcgagaaggg
gcggagcatgcacggcagctgtgggaggtgcttctggtggaggcggagcgtcgtacggtg
atgctggatgctgtgttccatgcccagcagtactacacgcaggcagccaaggcagattcc
tggctcagtggtcagaagctccaggtcatcaacgaggagagaggaacggatgagccaagc
accctgaggctcctgaaggagcagctcgctctggagcagacggtggagaactacgccgag
accgtcagcttcctgtctcagcagtgccgcaggatgctggagctcggacacccggacagt
gagcatatcaccaagcagcagtcccacatagaccgcctgtacgtgtcgctgaaggacctg
gtggagcagcgcaagaccaagctggagcagcagtactggctgtaccagctgaagcgtgag
gtggagggcctggagaagtggatagccgagcgcgaggcggtggccagctccacagagatg
ggacaggacctggagcatgtcacggttctgcaggagaacttcaccaagttcacgacggag
acgcgcgcggccggccagaggcagatggagtccgtcaacaagatggtgaatgagatgatc
gactgcggccacgtggacgccgccaccatcgccgagtggaaggacggtctgaacgagtcg
tgggctgacctgcaggagcttatggagacgaggagccagatgctggctgcctcccaccag
ctgcacaagttcttcaccgacggccaggaggtgttggttcagatcgagggcaagatgcgt
cagctccctgaggtgcgttcatgtcaggtgagcacagccaaccccggtacgctgcagagg
ctcctgcactcgtttgagcatgcgctccagctcctcgtcacccaggtgcggcagctacag
gagaatgctgcccagttgagggccatttacgctggggagaaggcagacgcaatcctggcc
cgtgagcaggaagtgatgcaagcctggagggaactgctggtttcctgcgagggcagccgt
gtgcaggtcaccacggtaacggacaaggtgcagttctttgccctggtgcgagagctgagc
atgtggacagatggcattatgggccagattggaccccatccggacagtgctagggacgtg
tcaggtgtagagacgatgatgtcccagcatcagaatctgaaggctaagatggaggccaag
agcaaagtcttcacccagtgtgtggaaatgggaaggatgctcctagcagcccgtaaccct
gcatctgaagaggtaaaggagaagctggaccatgtgatggccaagcagaaagacctgaat
gatcgatgggaccagcactgggaaaaactgcagcacacgcaacagagactccaagaagcc
cagaggattcaggccgagaaggcgtggctaacctccaaagagccaatgatcagccctgcc
agcccacgtgaaatgatgggcgggacaggaggggccgatgaggtggagcagctgattcgt
cggcatgaggcattccggaaagctgcggccacatggaaggaacatttcagctctttgcga
caggtggagaagctaaaggaggagaagagcaggcagtcttcttcttcatcgctgctcaac
aggcagatgtttcctctctcctgcctggtcgggagctcgtcctcctcatcgtcctcctcc
acgcccttcaggcagagtctccaggaccagctggacatcaagtctggcccagacgtgcca
caactggctgcccactccctcgcccagagactgggaactctggcatcctacagccctgtc
atgaacggctcgtcttaccacggcctcaacccacaagctggggtcggcatgtcggacaat
ccgggctatcacgtgctggtccaacaggccgggcagcttggagtggacagctccagttac
catgggctaaaccaacagggtatgatgggggtggacagctccagctaccaggggctgaac
aatcctggcatggggggtgccgccgctggcatgatgcccgagccgaagatggcgtacgcg
tggcagcacctgaagaccgactgcatgcagcccaagctaaaccacatccacaaggccgtc
ccagcgctactagaggctcaccacgcccagcagcagcagcagcagcagcagggccacccg
gtgggcgagatccacccaggcatcggcatcgacagcttggagctgctgcacggccggctc
cagagggacccccgcggcagccgctccgacccccagatggaccacctgcgacgggagcgc
gagtacaggctgggccggcagacctccagcgagcaggagatccaggcgcgcctcaacgag
ctgcccatgatcgtcaggcaggagcgctaccgccggcggctcgagcggcagtcgtccagc
gagcaggagcaggccagcggccaggccagtggtcaggccagcggcaagcccagcgaccag
gaatctgccacatcggacaagaggcctggggataaacgctccacaatggctgagattgtt
gagcaggttcaagaaagagaggcagcacaagcccgaggggaagtgtaccggccccccagt
gttctctcagcaccatgtggccgcctagaccgcccgcgggcgagggaccggcccaaacct
cggaggaggccgaggcccaaagagccagaggagacgacccgccgctctcgatcggcgccc
gcccagagtgcgcttgctgtgccagctatccccagccacaccgtccaggtggagggcttt
ctctaccgcaagcacgagcctgagggcaaggagaagagtcccaacagcaagtcctgggtg
aacctctactgtgtgctcaccaagggagagattggtttctacaaagatgcccgacacacc
accacgccatacaatgacgagccactactcaacctcaacacctgtacctgtgacagtacg
aatggatacaagaagaagaaaaacgccttcatcctgaaagtcccaaattcagatgactat
attttcctggccaaggatgaggaggagttcaagaagtgggtgtccagcatcaacgcctcc
ctgaaggagcacgaagacatcatcaagtgggagaagcccaccacctcgtccacagaccca
gacaagtcggagctgaatgtgcgctcggaaggagctgaccggtccgagggagccgaccgc
tcggagagaggcgacggctcggaaaaggctgacggctcggaaaaagtcgacacgtcggag
agggtggagggccgggacccagggtcgagcacttctggcaggagcaaatga
DBGET
integrated database retrieval system
