Alosa sapidissima (American shad): 121709246
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Entry
121709246 CDS
T11137
Symbol
pou4f4
Name
(RefSeq) brain-specific homeobox/POU domain protein 3
KO
K09366
POU domain transcription factor, class 4
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121709246 (pou4f4)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
121709246 (pou4f4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
HTH_31
Motif
Other DBs
NCBI-GeneID:
121709246
NCBI-ProteinID:
XP_041948397
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All DBs
Position
5:23180301..23183004
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AA seq
342 aa
AA seq
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MMSMNSKQPFSMHPMLHEPKYTSLHSSSEAIRRACLPTPSLQGNIFAGFDETLLQRAEAL
AAVDMAQKSHPFKPDATYHTMTTMTSMACTPTSSSAHLHHPSVLTSHHHHPHHQSTQGLD
GDLLDHLTPGISLGGMPGSDVCSSGTHHSHMSAINHMQHHHPQSMNMHPHSLGSHNSLSG
GGDSEPDPRELESFAERFKQRRIKLGVTQADVGSALANLKIPGVGCLSQSTICRFESLTL
SHNNMVALKPILEAWLEEAERAQREKMAKPEIFNGGDKKRKRTSIAAPEKRSLEAYFAVQ
PRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATH
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaatgaatagcaaacaaccttttagcatgcatccgatgttacacgagccgaag
tacacgtcgcttcactccagttcggaggccatcagacgggcatgtttaccaacaccctcg
ttgcagggaaacattttcgccggcttcgatgaaactttgctccagagggcagaggcgttg
gcggcggtggacatggcccaaaaaagccatccgttcaagccggacgcaacctaccacacc
atgacgaccatgaccagcatggcctgcacgcccacgtcctcgtcggcccatctccaccac
ccatcggttctgacttcgcaccaccaccatccacaccatcagtcgacacaaggcctggat
ggcgacctcctggatcatctgacccccggaatctctttgggcggcatgccgggctccgac
gtgtgctccagtggcacacaccactcgcacatgtcagccatcaaccacatgcaacaccac
cacccgcagagcatgaacatgcacccgcatagcctgggctcgcacaactcgctaagcggt
ggtggagattcggagcccgaccccagggagctggagtctttcgctgagcgattcaagcag
cggcgaatcaagctcggagtcactcaggcagacgttgggtcagccttggcgaaccttaaa
atccctggggtgggttgcctgagccagagcacgatttgtcggttcgagtcgctcaccttg
tcgcataacaacatggtcgccctcaagcccatcctggaagcgtggctggaggaggctgag
cgagcacagcgggagaaaatggcaaagccagaaatctttaacggaggcgacaaaaagaga
aaacgcacgtccatcgctgcccccgagaagcggtcgctggaggcgtacttcgcggtgcag
ccccggccctcgtccgagaagatagcggcgatagctgagaaacttgacctgaaaaagaat
gtcgtccgggtgtggttttgcaatcagcggcaaaagcagaaacggatgaagttctcagcc
actcactag
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