Alosa sapidissima (American shad): 121709251
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Entry
121709251 CDS
T11137
Symbol
cdx1b
Name
(RefSeq) homeobox protein CDX-1b isoform X1
KO
K09312
homeobox protein CDX1/4
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121709251 (cdx1b)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121709251 (cdx1b)
BRITE hierarchy
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GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121709251
NCBI-ProteinID:
XP_041948408
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Position
5:complement(30816376..30820681)
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AA seq
254 aa
AA seq
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MYVSYLLDKDPSMYSNTVRHPSLNLNHQNFVPAPPQYTDFTGYHHVPGINNDLHHSQAGT
WNPAYAPPREEWPPYGAGTTPSTSNPGQISFTPPDFSPVQPPGLLPPSINASVGQLSPNS
QRRNPYDWMRRSAPPSNPDGTGGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAE
LATSLSLSERQVKIWFQNRRAKERKVNKKKMQQSQPASTTTPTPPGSTMPGNVAMVTSSS
GGLVSPPMPIKQEY
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgagctatcttttggacaaggaccccagtatgtactctaatactgtcagacat
cccagtctaaatttgaaccatcagaacttcgtaccagcacctccacagtacacggacttt
acaggataccatcacgtcccgggaattaacaatgaccttcatcacagtcaggctggaact
tggaacccggcgtacgcaccgccgcgggaagagtggccaccgtatggcgcagggacgact
ccgtctacttccaacccgggacaaataagtttcactccccccgacttttcccccgttcag
ccacctggccttctgccaccttccatcaacgcaagtgttggccagctctcgccgaattcg
caacgcagaaatccttacgactggatgaggcgaagcgcaccgccgtccaacccagatggt
acagggggtaagacgaggacaaaagacaagtatcgggtggtgtatacagatcaccagcgg
ctggagctggagaaggagttccactacagccgctacatcaccatcaggaggaaggcagag
ctggccacctcactcagcctctccgaacgacaggtaaaaatatggttccagaatcggcga
gctaaagagaggaaggtgaataagaagaagatgcagcaatctcagccggcctccaccaca
acgcccactccacccggctccaccatgccggggaacgtcgccatggtgaccagcagtagt
ggaggcctagtgtcaccacccatgccaatcaaacaggaatactga
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