Alosa sapidissima (American shad): 121709309
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Entry
121709309 CDS
T11137
Symbol
rnft1
Name
(RefSeq) E3 ubiquitin-protein ligase RNFT1 isoform X1
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asad04121
]
121709309 (rnft1)
Enzymes [BR:
asad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121709309 (rnft1)
Ubiquitin system [BR:
asad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121709309 (rnft1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121709309
NCBI-ProteinID:
XP_041948510
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Position
5:17110218..17114191
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AA seq
424 aa
AA seq
DB search
MKLRTHHDRRNSYENRRALKLRESPIVMQTNSSETHTPSGNGLSLTLQPERLPRTPNTDG
SFNTLEPDDVRVSMTGSSTGPSGRHASRRTRAGSHSHSHTHGHSRPHPQPEPENESIDSD
LENGEPSTSFSEFRYLFRWIQKSLPFIIILCAKLIIQHALGLAVGIGLFTTFVYVNKNIQ
TQVFVQDRRSKFQCVWLLLFLISSTLLVYYAFLSDALYYCLIFMSPSIEPLGFWEVLWAV
GVTNFVAKFIFMGLKCLILLLPTSMAAYRTQGKWFMMTEEVGQVYQTLVPLPAWFRYLVT
YQEEDGRTGLTLGILLALVYLILKLLGLYGQWGSLQKTITIFLSNENSGAAATKSQCADA
GDVCPICRAEYREPRVLLCQHIFCEECIALWLNQDRTCPLCRTVITDKVHKWKTGATSAY
LQIY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcggactcaccatgacagaagaaattcctacgagaaccgaagagcgttgaaa
ctgagggaatctcccattgtaatgcagactaattcatcagagacgcacactccttcagga
aatggcttatccctaacactgcaaccagagcgactcccgaggacacccaacacggatggt
tctttcaacacattggaaccagatgatgtccgtgtctccatgactggctcatcgacagga
cctagcgggagacatgcatcgcgcagaacccgagcaggttctcacagtcactcgcatacc
catggacacagccgcccccatcctcaacccgaacccgagaacgaatccatcgattccgac
ttggagaatggagagccgagcacatcgttctctgaatttcgttacctctttcgctggatt
caaaaaagtcttccgttcataatcattctctgtgctaaacttattattcaacatgcatta
gggcttgctgttggaattggcttgtttacaacttttgtatatgtaaacaaaaatattcag
acccaagtgtttgtccaggatcgacgttcaaagtttcagtgtgtttggctcttgctgttc
ctgatatcttccacactcctggtatactacgctttcctcagcgatgcactttactactgt
ctcatttttatgagccccagtatcgagcccttgggcttctgggaagtcttatgggctgtc
ggggtgaccaactttgttgcaaagttcatcttcatgggattaaagtgccttattctcctg
ctccccacctccatggctgcatacaggactcaggggaaatggtttatgatgactgaggag
gttgggcaggtgtaccagacattggtgcccctgccagcctggtttcgttacctggtgacc
taccaggaagaagatggtcgcaccggcctgaccctgggtatcctgcttgctttggtctac
ctcatactgaagcttttgggactttatggacaatggggttctcttcagaaaacaattact
atctttctcagcaatgagaatagtggcgccgccgccaccaagagtcagtgtgctgacgca
ggggatgtgtgccccatatgtcgggcagagtatagagagccacgagtcctcctgtgtcag
catatcttctgcgaggagtgcattgctttgtggttgaaccaggacaggacgtgccctctc
tgcagaacggtcatcacggacaaagtacacaagtggaaaactggtgccacctctgcttac
ttacaaatatactga
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