KEGG   Alosa sapidissima (American shad): 121709391
Entry
121709391         CDS       T11137                                 
Symbol
arf1
Name
(RefSeq) ADP-ribosylation factor 1
  KO
K07937  ADP-ribosylation factor 1/2
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad04144  Endocytosis
asad05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:asad00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121709391 (arf1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    121709391 (arf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:asad04131]
    121709391 (arf1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:asad04147]
    121709391 (arf1)
   04031 GTP-binding proteins [BR:asad04031]
    121709391 (arf1)
Membrane trafficking [BR:asad04131]
 Endocytosis
  Lipid raft mediated endocytosis
   GRAF1-dependent endocytosis
    121709391 (arf1)
  Arf GTPases and associated proteins
   Arf GTPases
    121709391 (arf1)
 Endosome - Golgi transport
    121709391 (arf1)
Exosome [BR:asad04147]
 Exosomal proteins
  Proteins found in most exosomes
   121709391 (arf1)
GTP-binding proteins [BR:asad04031]
 Small (monomeric) G-proteins
  Arf/Sar Family
   Arf [OT]
    121709391 (arf1)
SSDB
Motif
Pfam: Arf Roc SRPRB G-alpha Ras Gtr1_RagA MMR_HSR1 GTP_EFTU 6PF2K FLAD1_M cobW
Other DBs
NCBI-GeneID: 121709391
NCBI-ProteinID: XP_041948679
LinkDB
Position
1:51386373..51390551
AA seq 180 aa
MGNLFANLFKVFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI
SFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELREAVL
LVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQK
NT seq 543 nt   +upstreamnt  +downstreamnt
atgggtaacctctttgctaacttgttcaaagtttttggcaaaaaggagatgcgaattctc
atggttggtcttgatgctgctggcaaaacgactattttgtacaagctcaaacttggtgaa
attgttaccactattccaactatcggcttcaatgtagaaactgtggaatacaagaacata
agtttcacagtttgggatgtgggtggtcaagataaaattcgaccgttgtggcgccattat
ttccagaacacacagggtctcatcttcgttgtggacagtaatgatagagagcgtgtcaac
gaagcccgagaggaacttatgagaatgttagctgaggatgagctcagagaagcagtttta
ttagtattcgccaacaaacaggacctccctaatgccatgaacgctgctgagatcacggat
aagctgggactgcactccttgcgccacagaaactggtacatccaggccacttgtgccacc
agtggtgatggcctgtatgaaggactagattggctttccaatcagctgcggaaccagaaa
tga

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