Alosa sapidissima (American shad): 121709497
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Entry
121709497 CDS
T11137
Symbol
usp53b
Name
(RefSeq) LOW QUALITY PROTEIN: inactive ubiquitin carboxyl-terminal hydrolase 53
KO
K27919
inactive ubiquitin carboxyl-terminal hydrolase 53
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
asad03037
]
121709497 (usp53b)
Cilium and associated proteins [BR:
asad03037
]
Other cilia and associated proteins
Stereociliary proteins
121709497 (usp53b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
121709497
NCBI-ProteinID:
XP_041948867
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All DBs
Position
1:complement(36727792..36748648)
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AA seq
1075 aa
AA seq
DB search
MAWVKLFKKQGGSLGKTYQPGSMVSLALTKGLLNEPGQNSCFLNSAVQVLWQLDIFRRSL
RQLSGHFCLGDACIFCALKSIFSQFQQSRERALPSDTLRHALAETFKDEQRFQLGLMDDA
AECFENILERIHLHIVANTASEVCTSKSCITHQKFAMTLYEQFVCRSCGASSDPLPFTEL
VHYVSTTALCQQVERILEKSDRLRADMFGELLQAANTMGDLRNCPSNCGQSIKIRRVLMN
CPEIVTIGFVWDAEQSDLTEDVIRSLGPHLNLSGLFYRVTDENAKRCDLHLVGMICYSSR
HYSAFAYHSKSSKWVFFDDATVKEIGSKWKDVASKCMRGHYQPLLLFYANPDGSAVSNED
APRQTTMWSHFKSPINGEVSVTDGPHSGSKKLDGVRDSAPLRSGQSSHKPTQQSASNSGY
SRLRTAPGSPSRFRESSRESFQRGGELQKKEGERAHRRPDSLQNRDMTYPRATSPPENGL
RSHPEQRMRSSQGRGSARQDRSSLHPQRSPQEPRPQPHPAPPNAAARRPEPRETEPPHER
GGGGLGSGGGGSGGGGGKARSSSWRPVREVLNVDSVLSELERRQQDSPRCARALPQQRAA
PPERKPKGLMTIYEDEGRHDSESRSSQDSQHRATHSKDGANASLRTENWTIQRTESGYES
SDRLSSGSTNPDSPGVENFAGKELKLAQDAPQLRGQVHHSRGEVKNDPARSPLYHSKHLL
KSQGKNSDHLVKCSPSSRRKLRYSSSSSKKGSTSERDPMPCNSRHEPEDLSLRGHRSDSP
PPRHLGKVSSSECNSSDDLTNPLSEQEDSAYRSSTSETAPAESPRPPPRPTAPGPXPRQE
PPPETPPTRAKPATGAAATRQGADARTPAFRPRLLQEPSQTSPRPSARTAAPSSSSSASS
AWRAEPSGVRTPSSDISSKSGSDQERSDGGSAGGSGGCAGEGGDRGRRGSDRSSSSSGAG
SGGGAGGPPSGLGVALTTYFSVDNCMTDTYRLKYHHQRPLLLSVAEPRLAGRGGGGGGGG
GGGGGGEHRDVGLPGETQGASEHGRSRADLGYASSKPTAKWNPVTPKGLDEHGFL
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggcatgggtgaaactcttcaagaagcagggtggcagtctgggaaagacctaccagcct
ggcagcatggtctccctcgccctcaccaagggcctactcaacgagcccggacagaacagc
tgtttcctcaacagcgctgtacaggtgttatggcaactcgacatcttcaggagaagtctg
aggcagctatcagggcatttctgtctaggggatgcctgtatattctgtgctcttaagagt
attttcagtcagttccagcagagtcgcgagcgagcgttgccgtcggacacgctacgccac
gccctggccgagacatttaaggacgagcagcgctttcagctgggcctgatggatgatgcc
gctgagtgctttgaaaacattctggagcgaatccatcttcacattgtggcaaacacggcc
tctgaggtctgcacttccaagtcctgcatcacgcatcagaagtttgccatgacgttgtac
gagcagtttgtatgtcgaagttgcggcgcctcttccgatcctcttccttttactgagttg
gtgcattatgtctcgacgacagcactctgccaacaggtggagagaatcttggagaagagt
gacagactgagagcagacatgtttggggaactcttgcaggcagcgaacactatgggtgac
ctccgcaactgtcctagcaactgtggccaaagtatcaagatccgccgtgtgctcatgaac
tgcccagaaatagtgaccatcgggtttgtgtgggatgccgagcagtctgacctcacggaa
gatgtcatcaggtcactgggtccacacctaaacctctcggggcttttctaccgggtcacg
gatgagaatgcgaaaaggtgcgaccttcacctggtgggaatgatctgctactccagtcgc
cactactctgccttcgcctatcatagcaagtcttccaaatgggtatttttcgatgatgct
acagtgaaagagattggatcgaagtggaaagatgtagcttccaagtgcatgcggggccat
taccagcccctcctgctgttctatgccaacccagatgggagtgccgtctctaatgaggat
gccccgagacagaccaccatgtggtcacactttaagtctcccatcaacggggaagtttca
gtgactgacggtcctcattcagggtcgaagaagcttgacggagtaagggacagtgctcct
ctgcgctccggacagagctcccataagcccactcagcagtccgcatctaactcaggctac
agcagactcagaactgctcctggtagtccgagccgattccgagagtcttccagggaaagt
ttccagaggggaggggagctgcagaagaaggagggggagagggcccatcgacgaccagac
tctctgcagaaccgagatatgacatatcctagggccacgtcacccccagagaatggcctg
cggtctcacccagaacagcggatgcgttcgtctcaaggccggggctccgcgaggcaggac
cgctcctccctccacccccagcgctccccccaggagccgcggcctcaaccccaccccgcc
ccccccaacgctgccgctcgccgcccggagccccgtgagacggagccgccgcacgagcgc
ggaggagggggactgggcagtggtggtgggggcagcggagggggaggggggaaggcgcgc
agctcgtcctggcgaccggtgcgcgaggtcttgaatgtggacagcgtgctgagcgagctg
gagcgccggcagcaggacagtccgcgctgcgcccgcgccttgccccagcagcgggcggcg
ccgcccgagcgcaagccgaagggcctgatgaccatctacgaggacgagggccgccacgac
agcgagagccgcagctcccaggactcgcagcaccgcgccacgcactccaaggacggggcc
aacgcgtccctccgcaccgaaaactggaccatccagcgcacggagtcgggctacgagagc
agcgatcggctgagcagcggctccaccaacccggactcgccgggcgtggagaacttcgct
gggaaggagctgaagctggcgcaggacgcgcctcagctcaggggtcaggttcaccacagc
agaggcgaggtgaagaatgaccccgctcgctctccactctaccatagtaaacatctgctg
aaatctcagggaaagaattcagatcacctggtgaaatgcagtcccagttccagaaggaag
ctcagatattcttccagcagttcaaagaaaggcagcacgtcagaaagggaccccatgccc
tgcaactctaggcatgaaccggaggatttgtccctccggggccaccgttcagacagtccg
ccaccaagacacttgggtaaagtgagcagctccgagtgcaacagctcggacgacctgacc
aacccgctatcggagcaggaggacagcgcgtaccgctccagcaccagtgagacggcgccg
gccgagtccccccgcccccccccgcgccccacagctcccggccccnncccacgccaggag
ccccccccggagacgcccccgacccgtgccaaaccggccaccggagcggccgccacacgc
cagggagcggacgcacgcacacccgcgttccggccgcgcctgctgcaggagccgtcccag
acgagcccgcggccgtccgcccgcaccgctgccccctcctcctcctcgtccgcctcctct
gcctggagagccgagcccagcggcgtccgcacgccctcctccgacatcagctccaagtcg
ggctcggatcaggagcgcagcgacggcggcagtgctggcggcagcggcggctgtgcaggg
gaggggggggacagaggccggcgcggctcggaccgcagcagtagcagctcgggtgcgggc
agcggtgggggtgcgggcggcccaccgtcggggttgggggtcgcgctcaccacctacttc
tcggtggacaactgcatgacggacacgtaccggctcaagtaccaccaccagaggccgctg
ctgctctctgtggccgagcccagacttgcggggagaggaggaggaggaggaggaggaggt
ggaggaggaggaggaggagagcaccgggacgtgggactccccggcgagacgcagggcgcc
tcagagcacggccggagcagagctgacctgggctatgcaagcagtaagcccacagcaaaa
tggaacccagtgactccaaaaggactggatgagcatggctttttgtga
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