Alosa sapidissima (American shad): 121709521
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Entry
121709521 CDS
T11137
Name
(RefSeq) protocadherin-10 isoform X1
KO
K16499
protocadherin delta 2
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asad04515
]
121709521
Cell adhesion molecules [BR:
asad04515
]
Cadherins
Protocadherins
121709521
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Other DBs
NCBI-GeneID:
121709521
NCBI-ProteinID:
XP_041948896
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Position
5:complement(28531249..28535957)
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AA seq
994 aa
AA seq
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MELRRAGRFCFWTGHLTCLALVASVLDLVLAQIRYSIPEELEHGAFVGNIAEDLGLDVNK
LSARRFRIVSGSKKQYLEVNLENGVLFVNERIDREELCEQNPSCSFHLQVVIENPLELYR
VEVEILDVNDNAPSFPWSEFNLDISESAVPGSRFPLESAQDLDVGTNSLDSYLLSVNEYF
SIDVQTRSDGSKFAELILENPLDREHQQLHQMVLTAVDGGSPERSGTTVINITVLDANDN
APVFDQSFYRVRLAENAPKGTVVIKLNATDLDEGPNGDITYSFSGHAPMRVRELFTVDAR
TGEIKVKGVVDYEKAKMYEIYVQAKDKGPSAVAVHCKVMVNVLDVNDNLPEVILTSVSTP
VQEDAQPGTVIAVISVMDKDSGENGNVDCEIPHHVPFQLHSSFRNYYTLVTCDFLDRETT
PEYNITLTARDMGTPPLYTRKTIVVQVSDINDNAPRFKQPSYTVYLTENNAPGASICSVS
ATDPDSDQNSYISYTILEGDIQGMPVSTYVSVNSDNGNLYALRSFDHEHLRNFQITVQAQ
DAGFPPLRANVTVNVFILDQNDNAPMIVAPVPKNGTAATEIVPRSADSGYLVTRVEAVDA
DSGQNSRLFYQILQASDQTLFTVALYTGEIRTIRRLVEKDPARQTLVVLVKDNGQPPLSA
TASIILSVVDSVPETLPDFGDLALGPQFDPNLTLYLIVSLGAISFTFLVAIIVLTAIKAY
RDKHAIRGCTLSISSCCGYRSEASSTEVIKKSNLNVQISSGTKGPTNHVEVNGTSALDQN
YCYKMCLTPESSKSDFTFLKPCSPTASTLRNNTKGVDRSTSTWSPPQYRLANNGSTSPNE
FVAAAAADKDWTLTKNQYNYAHKSTTGLAHMGKTLQRRPTHDPDSFTNSMGPQYWTWGSH
MRDYKMTMSSQVGGIPNRCWTPRYPQQSTAQPSPDYQHNVYIPGTASMQCTIKLANCDTL
DVYNSFSTFGKKKKKLISNYEQKEDPVITNDLFK
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcggcgcgccgggcgattttgcttctggacaggacacctgacctgcttggcg
ctggttgcctcggtcttggatctggttctggcacagatccgatatagcattcccgaggaa
ttggaacatggggcttttgtcggaaatatagcagaggacttaggcttggacgtcaacaaa
ctgtctgcacgaaggttcagaattgtttcaggctcaaagaagcagtatttggaggtgaac
ttggagaacggtgttttgtttgttaatgagcgcattgatcgggaggagctgtgcgaacaa
aacccatcttgttcttttcacttgcaagtcgttattgagaatcctttagagttgtacagg
gtggaagtcgaaattcttgacgtgaacgataacgcaccaagttttccttggagcgaattc
aacttggatatatccgagtcggccgtcccaggatctcgattcccgcttgagagcgcacag
gatctagatgtcggtactaactcgctggactcctaccttttgagcgtaaatgaatacttt
tccatagacgttcagacacgcagtgacggcagtaagtttgcagagcttattctggagaac
ccactagacagggagcaccagcaattacatcagatggttctgaccgcggtggatggaggt
tctccagagcggtctggtaccacagtaataaatataacagttctcgacgcaaatgataac
gcacctgtgttcgaccagtctttctacagagttagactggctgaaaacgctccaaaaggt
actgtagtaattaaactcaatgcaacagacctggatgaaggtccaaatggggacatcaca
tactcattcagcgggcacgcgccgatgagagtacgagaactgttcaccgtagacgcacgc
accggcgaaattaaagtcaaaggagtcgtggattatgaaaaggcaaaaatgtacgagata
tatgtccaggcaaaagacaagggtccatcagcggtggccgtgcactgtaaagtcatggta
aatgttttagacgtcaatgacaaccttcccgaggttatcctcacctctgtatccacgcca
gttcaagaggacgcgcaacccggcacagtgatagcggtcataagcgtaatggataaggat
tccggggaaaacggaaatgttgactgtgagattccccaccacgtcccttttcaactccac
tcatctttccgaaattattacaccttagtgacatgtgattttcttgacagggaaaccaca
cccgaatacaatataactctaactgcaagagacatgggcactccaccactatacacccgt
aaaactattgtggttcaggtatctgacatcaatgacaatgctcctcgattcaagcaacct
tcttacacagtttacttaaccgagaataatgccccgggtgcatccatatgctcggtatca
gctacggatccagactcggatcaaaattcatatatatcctatactattttagagggtgat
attcaaggaatgcctgtatccacctatgtttcagttaactctgataatggaaatttgtat
gcactgcgctcattcgatcatgagcatcttagaaactttcaaataactgtacaagcgcag
gatgctggctttccaccgttacgcgcaaatgttactgtaaatgtttttattttagatcaa
aatgacaacgcgccgatgattgtggctcctgtaccaaaaaatggaacagcggcgactgag
attgttccacggtcagccgattccggctatttagtgactagagtcgaagctgtggacgca
gactcggggcaaaactctcgtctgttttaccagatcctccaggcgtcggaccagacccta
tttaccgtggccttgtatacaggggagatcagaacaattcgccgactggtagaaaaggac
cccgcgaggcaaacacttgtcgttctggtgaaggacaacggtcagccacccctgtcggcc
actgcctccatcatattgtcagttgttgacagcgtgccagaaaccttgccagatttcggc
gaccttgcgcttggcccccagttcgacccgaatctaacgttgtacttaatagtatccctg
ggcgcaatttcattcacatttctggtggctattattgtcctaactgcaattaaggcatac
agggacaaacatgccatccggggatgcaccctatccatcagctcgtgctgcggctaccgc
tcggaggcctcctccacagaagtcattaaaaagtccaacttgaacgtgcagatatcctcg
ggaaccaaaggacccacgaaccacgtagaggtaaatggtaccagtgcactcgaccagaac
tactgctacaaaatgtgcttgacaccggaatcatctaagagtgactttaccttcctaaag
ccatgcagcccaacagcctcaacgctccgaaataacacgaagggggtcgaccggtcaaca
tctacatggagcccaccacaataccgtctggcgaacaatggaagcacctctccaaatgag
ttcgtggcggcagcagcggcagacaaggactggaccttgacaaagaatcaatataattat
gcacacaagagcactacgggcttagctcatatgggcaagaccctgcagcgcaggcctacg
catgatccagacagtttcacaaattctatggggccacagtactggacatgggggagtcac
atgcgagactacaagatgaccatgtcctcacaagtgggtgggatacccaaccgatgctgg
acgcccaggtaccctcagcaaagtacagcccaaccatcgcctgactaccagcacaacgtc
tacatcccgggcactgcatccatgcagtgcaccatcaagctcgccaattgtgacacccta
gatgtatacaactctttctctacgtttgggaaaaagaagaagaagctcatttctaattat
gaacagaaagaggaccctgtaataaccaacgaccttttcaaatga
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