Alosa sapidissima (American shad): 121709542
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Entry
121709542 CDS
T11137
Symbol
gabrg2
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-2 isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04080
Neuroactive ligand-receptor interaction
asad04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121709542 (gabrg2)
04082 Neuroactive ligand signaling
121709542 (gabrg2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121709542 (gabrg2)
Ion channels [BR:
asad04040
]
Ligand-gated channels
GABA-A
121709542 (gabrg2)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
PH_24
Motif
Other DBs
NCBI-GeneID:
121709542
NCBI-ProteinID:
XP_041948938
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All DBs
Position
5:25773727..25818125
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AA seq
477 aa
AA seq
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MVFLASENIPCKWSTAMLKPGFPVKIFLCVFLIVYLPSSSLQSENDDDEVTNKTWVLTPK
VYESDVTHILNSLLDGYDNKLRPDIGVKPTVIHTDMFVNSIGPVNAINMEYTIDIFFAQT
WYDRRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILY
TLRLTIDAECQLKLNNFPMDEHSCPLEFSSYGYPKEEIVYRWKRSSVEVGDIRSWRLYQF
SFVGLRNTSEIVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDA
VPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLHYFV
SNRKPSAKKDKKKKNPLLRLFSSKQTPTVDIRPRSATAIQMNNATHMQDRDEEYGYECLD
GKDCTSFFCCFEDCRSGAWRHGRLHIRVAKIDSYARIFFPTAFGLFNLVYWVSYLYL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcctggcctctgaaaatataccatgtaaatggtcgactgcgatgttgaaacct
ggctttccagtcaagatatttctctgtgtgtttttaatcgtatatcttccttcaagttcc
ctccaaagtgagaatgatgacgatgaagttacaaacaaaacctgggtgctgacccccaaa
gtctacgagagtgatgtcactcacatcttaaacagccttctcgatggctacgacaacaag
ctgcggcctgacattggagtgaagcccacagtgattcacacggacatgtttgtcaacagc
atcggcccagtaaatgctatcaacatggagtacaccatcgacatcttctttgcccagacc
tggtatgacagacggttgaagttcaacagcaccatgaaggtgctccgcctgaacagcaac
atggtcggcaagatctggatccctgacacgttcttccgcaactcaaagaaagccgacgcc
cactggatcaccacacccaataggatgttgaggatctggaatgatggacgcatactctac
accctgaggttgactatagatgccgagtgccaacttaaactgaacaactttccaatggat
gagcactcctgtcccctggagttctcaagctatggctacccaaaggaggagattgtgtac
aggtggaagaggagctcagtggaggttggagacatccgctcctggaggctctaccagttc
tccttcgtgggactccgcaacacctccgagatcgtgaggactgtctcaggggactacgtg
gtgctgacggtgttcttcgacctgagccgtaggatgggctacttcaccatccagacctac
atcccctgcacgctgatcgtggtcctctcttgggtctccttctggattaataaggacgct
gttcctgcaagaacctctttaggcatcaccacggtgctgaccatgacaaccctgagtacc
atcgcccgcaagtcccttccgaaggtgtcctatgtgacggccatggacctgttcgtgtcc
gtgtgcttcatcttcgtcttcgccgccctcatcgagtacggcaccctgcactactttgtg
agcaaccggaagcctagtgcaaaaaaggacaagaagaagaaaaatcccctcctccggctc
ttttcctcaaagcagacacccacggtggacatccgcccccgctcagccacagctatccag
atgaacaacgccacgcacatgcaggaccgcgacgaggagtatggctatgagtgtctggac
gggaaggactgcaccagcttcttctgctgtttcgaggactgccgctcaggcgcctggcgg
catggccgcttgcacatccgcgtcgccaagatagactcgtacgcccgcatcttctttccc
acggcgttcggtctgttcaacctggtctactgggtctcatatctctatctttag
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