Alosa sapidissima (American shad): 121709645
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Entry
121709645 CDS
T11137
Symbol
nsun5
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asad03009
]
121709645 (nsun5)
Enzymes [BR:
asad01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
121709645 (nsun5)
Ribosome biogenesis [BR:
asad03009
]
Eukaryotic type
Other ribosome biogenesis factors
121709645 (nsun5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NSUN5_N
NSUN5_fdxn-like
Methyltr_RsmB-F
RsmF-B_ferredox
FtsJ
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
121709645
NCBI-ProteinID:
XP_041949144
LinkDB
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Position
5:complement(13908997..13912292)
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AA seq
490 aa
AA seq
DB search
MALYSNAAGILDKVEQKRGAVKTLVYDSKFENIKQLFALVCETQKYSTVLQEIIDTTKLI
KETKLRINLAKVLVYDLLFGQGLKCGGHWKTLMMKHRSRLQAALARMKVKKKVSCNEDLL
PANVKKGDGDQLPRYVRVNTLKTTVDDVIDYMKREGFSYQGHANGIQDLCRLSDKAFISD
LHLPNLLVFSAKTDFHDHFLYKAGHVILQDKASCLPAFLLNPPAGSHVIDACAAPGNKTS
HLAALMSNKGKLFAFDLDAKRLSTMSTLLLRAGVTCQQLANQDFLKVDPQSAEYKDVKYI
LLDPSCSGSGMVCLRDGGSELPEEQAQAEAKEASRLQALSAFQQRCLTHALQFPRVQRVV
YSTCSIHTEENEQVVAACLQQNPAFRLVKLFPQWPERGLSPHTQCLRASNTKTLTHGFFV
AMFERQAPGSQAMNQQILPSPTVVPPVGGSLEAEEDVEELCSPEEEQQNSSAKKRKRNRN
RKRKKQKTTQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgtatagcaacgcagcgggtattcttgataaagttgaacagaaacgaggagct
gtaaagactttggtttacgacagcaagtttgagaacatcaagcagctctttgctctggta
tgcgagacacagaagtattcaacagtgttacaggagatcattgacactaccaagctgatc
aaagaaaccaagctccgaatcaatctcgcaaaggttcttgtgtatgatctgctctttgga
caaggcctgaaatgtgggggacattggaagacactgatgatgaagcatcgatcacgtctc
caagctgctctggctaggatgaaggtgaaaaagaaggtcagctgcaatgaggacctcctt
cctgccaatgtgaagaagggagatggagatcaacttccacggtatgtgcgagtgaacacc
ctgaagaccacagtggatgatgtcattgactatatgaaaagagagggcttctcctatcag
gggcatgcaaacgggattcaggatttgtgcaggctctctgacaaagcattcatcagtgac
cttcacctaccaaacctactggttttctctgcaaaaacagacttccatgaccactttctg
tataaagctgggcatgttattcttcaagacaaggctagctgtctgccagcatttcttctc
aacccccctgctgggagccatgttattgatgcctgtgctgcaccagggaacaagaccagc
cacctcgctgctctcatgagcaacaaggggaagctatttgcctttgaccttgatgccaag
cgcttgtccaccatgagcaccctactactcagagctggagtcacatgtcaacagttggcc
aatcaagactttctaaaggtggacccacagagtgcagaatacaaagatgtgaagtacatt
ctgttggatccttcatgcagtggatcaggaatggtatgtctgcgtgatggaggctctgag
ctgccagaagagcaggctcaggcagaggcgaaggaagccagtcggctacaggctctgtct
gcgttccagcagcgttgtctgacccacgcccttcagttcccacgggtgcagcgtgtggtc
tactccacctgctccatacacacagaggagaacgaacaggtggtcgctgcctgccttcaa
caaaaccctgctttcaggctggtgaagcttttcccacaatggcctgagcgaggactgtct
ccgcacacacagtgcctgcgtgccagtaacaccaagactctcactcatggcttctttgtt
gccatgtttgaacgacaagctcctggaagtcaagccatgaaccagcaaattctcccttcc
ccaacggtggttccacctgttggtggttctctcgaggcagaggaggatgttgaggagctt
tgttctccagaggaagagcagcagaactcttcagcgaagaagcgcaagaggaaccggaat
aggaagaggaagaagcagaagacaacacagtga
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