Alosa sapidissima (American shad): 121709729
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Entry
121709729 CDS
T11137
Symbol
rin1a
Name
(RefSeq) ras and Rab interactor 2
KO
K17638
Ras and Rab interactor 1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121709729 (rin1a)
Membrane trafficking [BR:
asad04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121709729 (rin1a)
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
SH2
Saf4_Yju2
Motif
Other DBs
NCBI-GeneID:
121709729
NCBI-ProteinID:
XP_041949266
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Position
5:complement(24899642..24909474)
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AA seq
826 aa
AA seq
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MQTDPVYDYPEAQPVGERQVCPQRGSLKSISVLDRLLLTHPVWLQLSINSATALHVLQRE
PPGTFLVRKSSTSQKKVLCVRLADDSVPSFVKQFVIREVDSTFSLDSSAIRFPDLCRLIA
FYCVSRDVLPFTLELPEAIARASSHKQLESISHMGVEFWSSQLNFRGPRNGPLPTAEVLA
PPPPALKPEDCITPIENPTLFEQFCPIRTRSPRELDIGTGQGALCFINPLFLQDEPALHR
RNRFKRSIKVRVSTENSSLLSPPVAPPPPPPLLAKAKKGKGARQKAAVVDEAKDRPKETA
AAPEEVSDYRAPSLLLPKKTRALVSPTLSPTAEEDDYQMPKALLRSCDQRREEEEEDEEE
EDEELSEDAGLVLEQRCAPSLSELESSSSLSSLDEAEEAERPPLHRGTSAPAAPLPSPTA
QPHPQPVSALRKMSAAFVSFFMPEKRVGRMVEELSRDRRLAFGGLVQDFLRQQRESLKLP
KVTSAVEMLQGIRHFLSQAKVFLQDCGELEPPIETLLPEDEKDQALEKAMFRSVLKPLKG
QIDGALRALHDRDGSSQRLAESLKRAKKNSPLELFGVQVNVPDAQGIEQVRQKLIMLQRA
YSPIDKVLLLLQVCKLIYKAMNKDKRKEFGADDFLPALSYVIVQCNLPELLIEVEYMMEL
LDTPWLTGEGGYYLTSVYASLCLIQSELTTPPASGLTREARESLKEWSHRRSNDSKRGKN
LQQRFVKVLFQNEESSLVKTLQWKKGVNVEVLAQVCAAKFGISEPDDYSLFWRKDGEPES
LPPDSKIDDFLALSGSRSPLIYQLQNPEARSRKLTRGGAVDLVESV
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgcagactgaccccgtgtatgactaccctgaggcccagccggtgggggagaggcaggtg
tgtcctcagagggggtccctgaagagcatcagtgtgctggaccgtctgctgctcacacac
cctgtgtggctacagctgtccatcaactctgccactgcccttcacgtcctgcaacgggag
cctcccgggacattcctggttcgcaagtccagcacatcccagaagaaggtgctctgtgtc
cggctggccgatgacagtgtgccctcctttgtgaaacagtttgtgattcgtgaagtggac
tccactttctccctggacagctcagccatacgcttccctgatctctgccgtctcattgcc
ttctactgcgtcagtcgggatgtcctgccatttactcttgaactgccagaggccatagcg
agagcctcatcacacaagcaacttgagtcaatctcccacatgggtgtagagttctggagc
tcacagctgaacttcagggggcctcgtaatggtcctctgcccactgctgaggtcctagcc
ccaccgcccccagctctcaagcccgaggactgcatcacgcccatagagaaccccaccctg
ttcgagcagttctgtcccatccgcacgcggagcccccgagagctggacatcggcacgggc
cagggagccctgtgcttcatcaaccccctcttcctgcaggacgagccggccctgcaccgg
cgcaaccgcttcaagcgcagcatcaaagtgcgcgtgtccaccgagaactccagtctgctc
tcgcctcccgtcgccccgccgccgccgccaccgctgctggccaaagccaagaaaggcaaa
ggcgcgcggcagaaggccgccgtggtggacgaggccaaagacagaccaaaggagaccgcg
gcagcgccagaggaggtctcagactaccgggcacccagcttgctgctacccaagaaaacg
agagctctggtgtcacccactctctcgccaacagcagaggaggacgactatcaaatgcca
aaagctctgctacggagctgtgatcagagaagggaggaggaagaggaggatgaggaggaa
gaggatgaagagttgagtgaagatgcagggctggtgctggagcagaggtgtgctccgtcc
cttagcgagctggagagcagcagctccctcagcagcctggacgaggccgaggaggccgag
cggccgcctctccacaggggcaccagcgcaccggccgcccccctccccagccctactgcg
cagccccatccccagcccgtctccgccctgcgcaagatgagcgccgccttcgtctccttc
ttcatgccggagaagcgcgtgggccgcatggtggaggagctgtcgcgcgaccggcgcctg
gccttcggcggcctcgtgcaggacttcctgcgtcagcagcgtgagagcctcaagttgcct
aaggtgacctcggccgtggagatgctgcagggcatccgccatttcctctctcaggccaag
gtattcctccaggactgcggggaactggagccccccattgagaccttgctgccagaggat
gaaaaagatcaggctctggagaaggccatgttccgctctgtgttgaaaccactgaaggga
cagattgacggagccctccgtgcacttcacgacagagatggctcctcccagcgcctggct
gagagcctcaaaagggcgaagaagaactcgcctctggagcttttcggggtgcaggtcaac
gtgccagatgcccagggcatagagcaggtacggcagaagctaatcatgctacagcgcgcc
tactctcccattgacaaagtgctccttctgctacaagtgtgcaaactcatctacaaggcc
atgaacaaagacaaacggaaggagtttggtgcagatgacttcctgccagctctctcctat
gtgattgtacagtgtaacctaccagagcttctgatagaagtagagtacatgatggaactg
cttgacactccatggctcactggagaaggtgggtactatctgaccagcgtttatgccagc
ttatgcctcatccagagcgagctgacgactcctcctgccagtgggctgactcgagaggcc
agagagtcactcaaagagtggagtcaccgccgcagcaacgactccaaaagagggaaaaat
cttcagcagaggtttgtgaaagtactcttccagaatgaggagagtagcttggtgaagacc
ctccagtggaagaaaggggtaaacgtggaggtcttggcccaagtctgtgctgccaagttt
ggcatcagtgagccagacgactacagtctcttctggagaaaagatggggagcctgagtct
cttccccctgactctaaaattgatgacttcttggccttgagtggcagtaggtctcccctt
atttaccagctccagaaccctgaggcaaggtcacgcaaactgaccagagggggtgctgtg
gacctagtggagtcagtgtaa
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