Alosa sapidissima (American shad): 121709837
Help
Entry
121709837 CDS
T11137
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121709837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asad04121
]
121709837
Enzymes [BR:
asad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121709837
Ubiquitin system [BR:
asad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121709837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
FANCL_C
pAdhesive_17
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
121709837
NCBI-ProteinID:
XP_041949398
LinkDB
All DBs
Position
5:complement(31417423..31493879)
Genome browser
AA seq
857 aa
AA seq
DB search
MTVLQRRLAGLWPWLLMAALQVVFGQTGLELAAAVESERSATRAVIKVTLLKHEHTITLE
GVFAGGSAGIAEGKLMQSHPLSLCNTSEDERQESKFISIVKLESPERNVHQCLPLLRKAR
LALERGAQAVIFDVTDHANAEHELQDSDSLTGPVVLVRASNAEELMGLVNKNEEAKVEIE
IMVEVQKWPHYDVVILLTVVLAVLAIVMIFAFRYRCKSNRTWDSVHQQTVCAISRLETRI
YSSQGCSGSQRHQGSRGSGSSSNSSPVCAICLEEFLDGQDLRIISCAHEFHKECVDPWLL
QHRTCPLCMHNIMGAEMAAARLPQRSRMQPPPEHSQAFLHPHPHPYPGPHSYPQHAIPFS
LRPSYHRGGPSGPYPPLGHYRGSPPIHPRTLRCRPLGPGCSYQLAPEGHHMGGGGRVHRT
AGGMCRSAGHLGAASLYGPPPRRSCHAYRCTSGPRTQHVPGGNGSGGGGGVQQARAGSGV
PHSRQDDGSCSGGSYRTERSGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWS
TFRSSLSSDYDPFVYRPGRGPRRDSLEGGRPRSLDSVMNRSGGCGDELLPPAPPAVFSHV
HYHRHRHHYYEDERSQPQGPGRGSSEELGAAAGVASGPVPAADKDSPLCSLAHPSCQCPK
VGHSDRSSHGGSEGQDKDMDRPMSPPGLLPAAAVLPSPPPPPCCHQGPPGRQHWRAMGGC
GLDASPAALPTVRFHQSLDLQDDCSIHIHYGQGPHAASYCCPPPPPDMPTAALLPVPLIL
DSAGMGEWPCCAGTHVVWQKRVQQAHSEPQLLEPMGPAADGHRCRGHHGHGAELPADICL
YCQTLHNNQGSEEESGV
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcctccagcggcgactggccgggctctggccgtggctgctgatggcggccctt
caggtggtgtttggccagacgggcttggagctggcggccgcagtggagtcggagcgatca
gccaccagagcggtcatcaaggtgactcttctcaaacacgaacacactatcactctggaa
ggggtgtttgctggagggagcgccggcatcgcagaagggaaattgatgcagtcccaccca
ttgtctctgtgcaacaccagtgaggatgagcgtcaggagagcaagttcatcagcatcgtc
aagctggagagccccgaacgcaatgtgcaccagtgcctgccgctgctgcgcaaggctcga
ctggctctggagagaggtgctcaggctgttatctttgatgtcactgaccatgctaatgcg
gagcatgagctgcaggactcggactctctgaccgggcctgtggttctggtgcgcgccagc
aatgccgaggagctcatgggcctggtcaacaaaaacgaggaggccaaggtcgagatcgag
atcatggtggaggtccagaaatggccccactatgatgtggtcatcctgctcactgtggtc
ctggcagttctggccattgtcatgatcttcgccttccgttatcgctgcaagtccaacaga
acctgggattcggtgcatcagcagacggtgtgcgccatcagcagactggagacgcgcatc
tacagctcccagggctgctcggggtcacagcgccaccaagggtcccgggggtctggcagc
agctccaactctagccctgtctgcgccatctgcctggaggagtttctggatggacaggat
ctgcgcatcatctcgtgtgcccatgagttccataaggagtgtgtggacccctggctgctg
cagcaccgcacctgccccctctgcatgcacaacatcatgggtgcagagatggccgccgcc
cggctgccccagaggagccgcatgcagcccccgcccgagcacagccaggccttcctccac
ccgcacccccacccataccccggcccccacagctacccgcagcacgccatccccttctcc
ctgcggccctcctaccaccgtggggggccctcgggaccctaccccccgctgggccactac
cggggctcccctcccatccacccgcggacgctccgctgccggcccctgggccccggctgc
agctaccagctggctcccgagggccaccacatgggcggtgggggccgcgtgcacaggaca
gcgggggggatgtgccggagcgcggggcatctgggagcggcgtccctgtacggaccgccg
cctcggcgctcttgtcacgcgtaccgctgcacgtccgggccgcggacgcaacacgtgcct
ggcggcaacggcagtggtggtggtggtggtgtccagcaggcgcgcgctggcagcggtgtg
ccgcacagccgacaggacgacggcagctgctcggggggcagctaccggacggagcgcagc
ggctacctggcagacgggccggccagcgactccagctcggggccgtgccacggctcgtcc
agcgactccgtcctcaactgcaccgacgtcagcctgcagggcgtctacggcagctggtcc
accttccgcagctcgctcagcagcgactatgaccccttcgtgtaccggccgggccgcggg
ccgcgccgcgacagcctggagggcggccgcccgcgctccctggactccgtcatgaaccgg
agcggcggctgtggggacgagcttctcccgccggcgccccctgctgtcttcagccacgtg
cactaccacagacaccggcaccactactacgaggacgagcgcagccagccccaggggccc
ggccgagggtccagcgaggagctcggggcagcggccggggtggccagcggccccgttccc
gccgcggacaaagactcgcccttgtgctcgctcgcgcacccctcctgccaatgccccaag
gtgggccactcagacaggtcaagccacggagggtcagaggggcaggacaaggacatggac
cggcctatgtctcccccgggcctgctgccggccgctgcggtgctgccctctcctccccct
cctccctgctgccaccagggcccaccggggcggcagcactggcgggcgatgggcggctgt
gggctggacgcttctcccgcggcactgcccacagtgcgcttccaccagagcctggacctg
caggacgactgcagcatccacatccactacggccagggcccccatgccgccagctactgc
tgcccgccgccaccgccggacatgcccaccgccgccctgctgcccgtgcccctcatcctg
gactcggcgggcatgggcgagtggccgtgctgtgccggcacccacgtggtgtggcagaag
cgcgtgcagcaggcgcactcggagccccagctcctggagcccatgggccccgcggccgac
ggacaccgctgcaggggtcaccatggccacggggctgagctgcccgcggacatctgcctg
tactgccaaacactacacaacaatcagggatcagaggaggagtctggtgtgtga
DBGET
integrated database retrieval system
