Alosa sapidissima (American shad): 121709884
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Entry
121709884 CDS
T11137
Symbol
tmtops3b
Name
(RefSeq) teleost multiple tissue opsin 3b
KO
K04256
c-opsin
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
asad01009
]
121709884 (tmtops3b)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
asad04030
]
121709884 (tmtops3b)
Protein phosphatases and associated proteins [BR:
asad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121709884 (tmtops3b)
G protein-coupled receptors [BR:
asad04030
]
Rhodopsin family
Vision
Opsin
121709884 (tmtops3b)
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Ortholog
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
121709884
NCBI-ProteinID:
XP_041949528
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Position
5:16014136..16028140
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AA seq
400 aa
AA seq
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MTIIHGDLNSSTMDSTTLDPTTDVSRLPRALKDLPELSRTSHTIVAVCLGIIFVLGFLAN
FCVLLVFARFQVLRTPINLILLNICVSDMLVCIFGTPFSFAASIYGRWLIGLSGCKWYGF
ANSLFGIVSLVSFAVLSLERYSTMVCCTKADVSDYRKAWLSIGGCWLYSLAWTLPPLFGW
SSYGPEGPGTTCSVQWHQRSPGNVAYVTCLFVFCLLLPLVLMVYCYGKILMAIRGAARIN
QTSCQRRETHVLLMVLSMVSCYLLCWMPYGVVALLATFGRVGVVGPTASIIPSILAKSST
VLNPIVYVLFNNQFYRCFMAFVQCGPGSQRHNYLHTLQSSPALAGHPNCMPLSPLGGLSS
TANSPARLEEQTPHRPAKDQQQCQLQTDKQSLVLVVHYTP
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcattcacggtgacctgaatagtagcaccatggacagcaccacgttagacccg
acaactgacgtttcgcgtttaccgcgagctctgaaagacctcccggaacttagcaggacc
agtcacactatagtggcagtatgtctcgggataatttttgtcctgggtttcttggccaac
ttttgtgtacttcttgtttttgctcgtttccaggttcttcggacaccaatcaatctcatt
ctccttaatatttgcgtaagtgatatgttagtatgtattttcggcactccgttcagcttt
gctgctagtatctacggtagatggctcattggactttctggctgtaaatggtatggcttt
gccaactcactctttggcattgtttccctcgtatcttttgccgttttgtctttggagcgc
tattcaaccatggtctgctgcaccaaggcagatgtctccgactaccggaaagcctggctg
tccatcggcggctgctggctgtactccctggcgtggacgctgccgccgctctttggctgg
agcagctatggccccgagggcccgggtaccacctgctccgtgcagtggcaccagcgttcc
cccggcaatgtcgcctatgtgacctgcctcttcgtcttctgcctgctcctcccgctggtg
ctcatggtttactgctatggcaagatcctgatggccatccgcggggcagcccggatcaac
cagacatcatgccagcgtcgggagacccatgttttgctcatggtactgtccatggtctcc
tgttacctgctctgttggatgccctatggggtggtagcgttgctggccacgttcggcagg
gtcggtgttgttggccccacagcgagcatcatcccctccatactggccaagtccagtact
gtgctcaatcccatcgtctatgtgcttttcaataaccagttctacaggtgtttcatggca
tttgtgcagtgtggtccaggcagtcagaggcacaactacctccacactctccagagcagc
ccagccctggcaggccacccaaactgcatgcctctcagtcccctgggcggcctgtccagc
accgccaactcgccagcacgcctggaggagcagactccccaccggccagccaaagaccag
cagcagtgccagctgcagacagacaagcagtcgctggtcctggtggtacactacactcca
taa
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