Alosa sapidissima (American shad): 121709931
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Entry
121709931 CDS
T11137
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoproteins C1/C2
KO
K12884
heterogeneous nuclear ribonucleoprotein C1/C2
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121709931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asad03041
]
121709931
Spliceosome [BR:
asad03041
]
Common components
Common spliceosomal components
hnRNP proteins
121709931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CDC27
RNA_pol_3_Rpc31
RRM_5
UPF0688
Nup35_RRM_2
CoV_nucleocap
PPP4R2
DDHD
Motif
Other DBs
NCBI-GeneID:
121709931
NCBI-ProteinID:
XP_041949599
LinkDB
All DBs
Position
1:complement(45550338..45562963)
Genome browser
AA seq
307 aa
AA seq
DB search
MDRSPSLASLMASNVTNKTDPRSLNSRVFIGNLNTMLVTKADVEAIFAKYGKIVGCSVHK
GYAFVQFANERNARAAVASEDGRMVVGQVLDINLAAEPKPHRAKTTKRSAGDMYSSSTFD
LDYDFQRDYYDRVYSYPSRVPPPPPPXLPRAVIPSKRPRVSISSGGSRRTKSSFSSSKSS
QRTSSRTMKADDLQTIKKELTQIKNKVDYLLESLDRMEKDHSKKSEGKSVKTEAGEASSL
QHTSSKKEREPQELNDSEEEGDLLEEEEEEEEVKSQGRENEEEEEEGEEGEQEEGEDDGD
SVNGDDS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggatcgctcaccttccctggcaagcctgatggccagcaacgtgaccaacaagacggac
ccacgttcgctcaactcgcgggtcttcatcggcaacctcaacaccatgctggtgaccaag
gccgatgtggaggccatcttcgccaagtacggcaagatcgtgggttgctctgtgcacaag
ggctacgccttcgtgcagttcgccaacgagaggaacgccagggcagccgtagccagcgaa
gacggtcgtatggtcgtggggcaggttctggatattaatttagccgcagagcccaaacca
cacagggcaaagactacaaagcgctcagcaggagacatgtacagtagttcaacatttgac
ctggactatgacttccagagagattactatgacagggtgtactcgtacccatcacgtgtg
cctcccccgccaccccccnncctcccacgtgcagtcatcccctccaagcggccccgtgtc
agcatcagcagtggtggcagccgccgcaccaagtccagcttctcctcgtccaaaagcagc
cagaggacatcctcacgcaccatgaaggcagacgatctgcagaccattaaaaaagagctg
acgcagataaaaaataaggtggactatctgctggaaagtctggaccgtatggagaaggat
cacagcaagaagtccgagggtaagagcgttaagacagaagctggagaggcatcgtcccta
cagcacaccagcagcaagaaggagcgggagcctcaggagctcaatgactccgaggaggag
ggagacctgctggaggaggaggaggaagaggaggaggtgaagagccaaggaagagagaat
gaggaggaagaagaggaaggcgaggagggggagcaggaggaaggcgaagatgacggagac
agtgtcaacggagacgactcctaa
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