Alosa sapidissima (American shad): 121709973
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Entry
121709973 CDS
T11137
Symbol
pdzd3b
Name
(RefSeq) PDZ domain containing 3b isoform X1
KO
K24059
PDZ domain-containing protein 3
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
asad04990
]
121709973 (pdzd3b)
Domain-containing proteins not elsewhere classified [BR:
asad04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
121709973 (pdzd3b)
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GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
GRASP55_65
Motif
Other DBs
NCBI-GeneID:
121709973
NCBI-ProteinID:
XP_041949668
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Position
5:complement(32177337..32183499)
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AA seq
490 aa
AA seq
DB search
MEVTDKFTFNPKEGIDNPAMTEVAESEAVVTPTPRLCILKREESESFAFHLRVERGLLGH
VVRQVTPWGVAERNGVKDGDRLLEVNESFLDDAKHTEVARKIHISGTQLCLLLLDGKAYD
QAVAQGCDLKALARAQRGEDWDPPRLCHIARDSSQGLGLRILPIEGEKGKFSMSPSSGGP
AEKAGVRKGDHLIWLDGATVSELSHSAISKMVKKCDHMTVLVIDSKSEQTYVSRRMPILP
SMAVAHNLPHKPRKLHLVQAPEGYGFLLRLEKTPSKHNIHVLREVDPDSPAERAGIQEGE
ILLEVNEELITNLKHNDVVNRIRQSGQQVTLTIISLQGQDFFTRLGLSPLLFYEDTSAEP
SESAELQQTADHCSDPQCAPAGEPPKPRVCVLSKGPSGYGFHLGCVLQKPGTYISQVVAE
GPGGRAGLLKGDVVMEVNGTNVEEEYLEDVIVLIKEAGDSLSLLVVEPLGYEKLLQSRNV
VIAEQTANGS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgactgacaaattcaccttcaacccaaaggagggaattgacaacccagcaatg
actgaagtggctgagtcagaggctgttgtaaccccgacgccccgcttgtgtattttgaaa
cgggaggagagcgagagcttcgccttccacctgcgtgtggagaggggcctcctgggtcac
gtggtccggcaggtgaccccgtggggggtggccgagcggaacggggtgaaagatggggac
cggcttctggaggtcaacgagagcttcttggatgatgcaaaacatactgaggtggcaagg
aagatccacataagcgggacacagttgtgtctcctgctgttggatgggaaggcgtacgat
caggccgtggctcagggctgtgacctcaaagcactggccagagcccagcgaggagaggac
tgggacccaccccgtctctgccacatcgccagagactccagtcagggccttgggctcagg
attctccccatagagggggagaaggggaagttttctatgagcccatccagtgggggtccg
gctgaaaaggcaggcgtgcgcaagggtgaccacctgatttggctggacggcgccaccgtg
tctgaactctctcactcagccatcagcaaaatggtgaagaaatgtgatcatatgacagtc
ctggtgattgacagcaaaagtgagcagacctacgtgagtcgccggatgcccattctcccc
tcgatggccgtcgctcacaatctgccacacaagccccgaaagttgcaccttgtccaggcc
cctgaaggatacggcttcctgctgagactggagaaaacgccctccaaacacaacatacat
gtgctgcgtgaggtggaccctgacagcccagcagagcgagcagggatacaggaaggggag
atactgctggaggtcaatgaggaactcatcacaaatttgaagcacaatgatgtcgtcaac
aggatacgtcagagtggccagcaggtcacactgaccatcattagcctacaaggacaggat
ttctttacaaggcttggtctttcaccattactcttttatgaagacacatctgctgagccg
agtgaaagtgctgaactccaacagactgctgaccactgcagtgaccctcagtgtgcccca
gcaggcgagcctcccaagcccagggtctgtgtcctcagtaagggtcccagcggctatggc
ttccacttgggatgcgttctccagaaaccgggaacctacatcagtcaggtagtggcagag
ggacctggggggagagctgggctgctgaaaggggatgtggtgatggaggtgaatggaaca
aacgtggaggaggagtatctggaggatgtgattgtgcttattaaagaggctggtgattct
ctctctctgctggtcgtggagcccctgggatacgagaagctgctgcagagcaggaatgtc
gtcatagccgaacagacagctaatggctcttaa
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