Alosa sapidissima (American shad): 121709997
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Entry
121709997 CDS
T11137
Name
(RefSeq) paired box protein Pax-3-like isoform X1
KO
K09381
paired box protein 3/7
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121709997
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121709997
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Pax7
HTH_23
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
121709997
NCBI-ProteinID:
XP_041949720
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Position
1:complement(44864875..44888747)
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AA seq
492 aa
AA seq
DB search
MTALAGGIPRMMRPTPPQNYPRGGYSLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQTTTPDVDKKIEE
YKRENPGIFSWEIRDKLLKDGICDRNNVPSVSSISRTLRCKFGGSAEDDDEEDEMERRVL
DENERRGKHSIDGILGDRSSHSDEGSDVDSEPGLPLKRKQRRSRTTFTAEQLEELERAFE
RTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSAM
SSLQPYQLSDSPYPPSSISQAVSEQASTVHRPQPLPPTSVHQSGLTSSGGQDGSSAYCLA
SGRHGFSGYSESFVPPPPGHSNPVNPAIGNGLSSQVMGLLNPGGVPHQPQGDFALSPLTG
GLEPNAGMPTSCHGSQRLEGLPGLPSMPTLPSSQSYCPPTYSSPAYSVDHVTSYQYGQYG
QSAFHYLKPNIG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgacagccttagcggggggcataccgagaatgatgcgccccacgccgccacaaaattat
cccagaggaggatactctcttgaagtttccacgccattaggtcagggtcgagtaaaccaa
ctcggtggagttttcataaatggacggcctttgcctaatcatatccgacacaagattgtg
gagatggcccaccatggtatccggccatgcgttatctcccgtcagctccgagtgtcacac
ggctgtgtgtccaaaatcctgtgcaggtaccaggagactggatctatccggcccggtgcc
ataggaggaagtaagcccaagcaaacaacaactcccgatgtagacaagaaaatcgaagag
tacaagagagagaatcctggaatatttagctgggagatcagagataagttactcaaagat
gggatatgcgaccgcaacaatgttccttcagtgagttcaatcagtcgcactttgcgatgc
aaattcggaggaagcgccgaagacgacgatgaagaagacgaaatggaaaggagagtacta
gacgaaaacgagagaagaggcaaacacagtattgatggcattcttggcgatagatcgagt
cactctgacgagggttctgacgtggactcggaaccgggcctgcccctgaagaggaagcag
cgacggagtagaaccaccttcacagcggagcagctggaggagctggagcgggccttcgag
cgcacacactacccggacatctacaccagagaggagctggcccagagagccaagctcacg
gaggcacgtgtgcaggtctggttcagcaaccggagagctcgctggagaaagcaagcaggg
gccaatcagcttatggccttcaaccacctaatccccggagggttccccccctcagccatg
tccagcctacagccctaccagctctccgacagcccctaccctccctcgtccatatcgcaa
gcagtgtctgagcaggccagcacagtgcacaggccccagcctctgcccccgacttccgtg
caccagtcgggcttgacctcctcgggaggccaggacggcagctcggcctactgcctggcc
tctggacgtcacggcttctccggctactccgagagcttcgtgcccccaccgcccggccac
tccaaccctgtcaaccccgccatcggcaacggcctctcctctcaggtgatgggtctactc
aaccccggaggagtgccccaccagccccagggtgacttcgccctctcgcccctgacaggc
ggcctggagcccaacgcgggcatgcccaccagctgccacggctcccagcgtctggagggg
ctgcccggcttgcccagcatgcccacccttcccagctcccagtcctactgtccccccacc
tacagctcccccgcctacagtgtggaccacgtcacctcctaccagtacggccagtatggg
caaagtgcctttcattatttgaagcccaacatcggctga
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