Alosa sapidissima (American shad): 121710975
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Entry
121710975 CDS
T11137
Name
(RefSeq) WD repeat-containing protein 20-like isoform X1
KO
K24741
WD repeat-containing protein 20
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
asad04990
]
121710975
Domain-containing proteins not elsewhere classified [BR:
asad04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
121710975
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
EIF3I
WD40_Prp19
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Beta-prop_HPS5
NBCH_WD40
Ge1_WD40
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
121710975
NCBI-ProteinID:
XP_041950141
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All DBs
Position
6:6471161..6479469
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AA seq
633 aa
AA seq
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MQISKMAVEGGGKEMNEIKTQFTTREGVYKLLTHSEYSRPNRVPFNSQGSNPVKVSFVNV
NDQSGNGDRICFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNPLSATAES
VSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVRWVPGSESLFLVSHASGSLY
LYNVEHSCVSAPPHYQLLRQGDGFAVHTCKSKQARNPLRRWTVGQGTLNEFAFSPDGRHV
ACASQDGYLRVLGFDSGELHGAMKSYFGGLLCVCWSPDGRYVVAGGEDDLVTVWSFGERR
VIARGHGHKSWVSVVAFDPCTTTIVGVDGDAPAEFSGSDDDFQETPAPAAAAADFGRERA
NSAQSRLSKCNSTDGCAMSVSYRFGSVGQDTQLCLWDLTEDILFPHLPLSRTRTHTNVMN
ATTTTNATTTTNATPNANSTAGTNGGGDKTPVLSHPQTNCLSGGSLPRSNSLPHSTAPPG
GSTPNSHPKASSIMESALIATGVHKFATLTLAHDSRKERHHEKEHRRNHSVGYVGSKSND
KLNQLSGSRSATGSAGPGRTLGTTLCPHMEEVPVLEPLVCKKIAHERLTVLIFLDDCLVT
ACQEGFICTWARPGKVGLLSSQNPGSSPSGTVV
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatttccaagatggcggtggagggaggagggaaggagatgaacgaaattaaaact
caattcaccactcgggaaggcgtctataaactcctcacgcactccgaatacagccgtccc
aacagagtgccttttaattcacagggctccaacccggtcaaagtctctttcgtgaacgtc
aacgaccagtccggtaacggcgacagaatctgtttcaatgtgggccgggaactctacttt
tatatttacaaaggcgtgagaaaggctgccgacctgagcaagcccatagacaagcggata
tataagggaacgcagcccacgtgtcatgacttcaacccgctgtcggcaacggccgagagc
gtctccctgctggtgggcttctccgccggacaggtgcagctcatcgaccccatcaagaag
gagaccagcaagctgttcaacgaggagaggctgatcgacaagtctcgggtgacgtgcgtg
cggtgggtgccgggctcggagagcctcttcctggtgtcgcacgccagcggcagcctgtac
ctgtacaacgtggagcacagctgcgtctcggcgccgccgcactaccagctgctgcggcag
ggcgacggctttgccgtgcacacctgcaagagcaagcaggcgcgcaacccgctgcgccgc
tggacggtgggccagggcacgctcaacgagttcgccttctcgccggacggccggcacgtg
gcgtgcgccagccaggacggctacctgcgcgtgttgggcttcgacagcggcgagctgcac
ggcgccatgaagagctacttcggcggcctgctgtgcgtgtgctggagccccgacgggcgg
tacgtggtggcgggcggcgaggacgatctggtgacggtgtggtcgttcggcgagcggcgg
gtcatcgcgcgcggccacggccacaagtcgtgggtcagcgtggtggcgttcgacccgtgc
accaccaccatcgtgggcgtggatggcgacgcgccggccgagttcagcggcagcgacgac
gacttccaggagacgcccgcccctgcggcggcggcggcggacttcgggcgcgagcgcgcc
aacagcgcccagtcgcgcctctccaagtgcaactccacggacggctgcgccatgagcgtc
tcctaccgcttcggctcggtggggcaggacacccagctgtgtctctgggacctcaccgag
gacatcctgttcccccacctgcccctgtcccgcactcggactcacaccaacgtcatgaac
gccaccaccaccactaacgccaccaccactactaacgccaccccgaacgccaacagcacg
gcgggcaccaacggtggcggagacaagacgcccgtgctgtcccacccgcagacgaactgt
ctgtccggcggctcgctgccgcgctccaacagcctgccgcactccacggcgccgccaggg
ggcagcacccccaacagccaccccaaggccagcagcatcatggagagcgcgctgatcgcc
acgggcgtgcacaagttcgccacgctcacgctggcgcacgactcgcgcaaggagcgccac
cacgagaaggagcaccgcaggaaccacagcgtgggctacgtcggcagcaagagcaacgac
aagctcaaccagctgagcggctcgcgctcggccacgggctcggcagggccgggcaggact
ctgggcaccaccctgtgcccgcacatggaggaggtgcctgtgctggagccgctggtgtgc
aagaagatcgcccacgagaggctcaccgtgctcatcttcctggacgactgtctggtcacc
gcctgccaggagggattcatctgcacgtgggcaaggcccggcaaggtgggccttctgtcg
tcccagaaccccggcagctctccgagcgggacggtggtgtag
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