Alosa sapidissima (American shad): 121711046
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Entry
121711046 CDS
T11137
Symbol
psmc6
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
asad
Alosa sapidissima (American shad)
Pathway
asad03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121711046 (psmc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
asad03051
]
121711046 (psmc6)
Proteasome [BR:
asad03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
121711046 (psmc6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_2
AAA_22
AAA_5
OB_PRS7
RuvB_N
nSTAND3
DUF815
AAA_14
Prot_ATP_ID_OB_N
AAA_7
AAA_11
AAA_lid_PRS2_C
TIP49
AAA_33
RNA_helicase
AAA_18
AAA_3
Csa3_N
NPHP3_N
Mg_chelatase
DUF5906
bpMoxR
Mua
AAA_28
TsaE
DUF3829_2nd
NACHT
AAA_24
AAA_25
Vpar_1526
Occludin_ELL
AAA_17
CLIP1
Parvo_NS1
MC5
IstB_IS21
DUF4140
ApoB100_4ins
COG4_N
Neur
Motif
Other DBs
NCBI-GeneID:
121711046
NCBI-ProteinID:
XP_041950266
LinkDB
All DBs
Position
6:complement(24270088..24276775)
Genome browser
AA seq
389 aa
AA seq
DB search
MADTREKGLQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLDKTKLKPGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK
TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IELPNEQARLDILKIHSGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHE
YVTQEDFMKAVRKVADSKKLESKLDYKPV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaccagagagaagggcttgcaagactacaggaaaaaattgttggaacacaag
gaaattgatggacgtttaaaagaattgagggaacagctgaaagagctgacaaagcagtac
gaaaagtctgagaatgacctaaaggccctccagagtgttggacagattgttggtgaggtt
ctcaaacaactaactgaagaaaaattcattgtcaaggcaaccaatgggcctcgttatgtg
gtgggctgccgcagacagctggataaaactaagcttaaacctggcactagagtggccctg
gacatgaccacactgaccatcatgaggtaccttccccgagaggtggatcctcttgtgtac
aacatgtctcacgaagacccaggcagcgtctcatactcagagatcggcgggctctctgag
cagatcagagaacttagagaggtgattgagctgcctctgaccaatcctgagcttttccag
agggtgggcatcatccctcccaaaggctgtctgctctatgggcccccaggtacgggcaag
acccttttggcccgagccgtggccagtcagcttgactgcaacttcctcaaggtggtgtcc
agttccatcgttgacaagtacattggtgagagtgcccgtctcatcagggagatgttcaac
tatgctagggaccaccagccttgcatcatcttcatggatgagattgatgccattgggggt
cgtcggttctcggaaggaacatctgctgacagggagattcagaggacactgatggagctg
ctgaatcagatggacggttttgacaccctgcacagggtcaagatgatcatggctaccaac
cggccagacaccctggaccctgctctgctgcgccctggaaggctggacaggaagattcac
attgaacttcccaatgagcaggctcgtttggacatcctgaagatccactctggtcccatc
accaagcatggagagatagattatgaagccattgtgaagctctccgatggattcaatgga
gctgacttgagaaatgtgtgcactgaagcaggtatgtttgcaatccgtgcagaccacgag
tacgtcactcaagaggacttcatgaaggctgtgcgcaaggtggccgactccaagaaactg
gagtccaagctggactacaagcctgtatag
DBGET
integrated database retrieval system
