Alosa sapidissima (American shad): 121711056
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Entry
121711056 CDS
T11137
Symbol
psma6b
Name
(RefSeq) proteasome subunit alpha type-6
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121711056 (psma6b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asad01002
]
121711056 (psma6b)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
asad03051
]
121711056 (psma6b)
Enzymes [BR:
asad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
121711056 (psma6b)
Peptidases and inhibitors [BR:
asad01002
]
Threonine peptidases
Family T1: proteasome family
121711056 (psma6b)
Proteasome [BR:
asad03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
121711056 (psma6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
AMIN-like
Ribophorin_II
Motif
Other DBs
NCBI-GeneID:
121711056
NCBI-ProteinID:
XP_041950280
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All DBs
Position
6:complement(23436747..23444700)
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AA seq
246 aa
AA seq
DB search
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVVVTQKKVPDKL
LDAATVTHLFRITENIGCVMSGMTADSRSQVQRARYEAANWMYKYGYEIPVDMLCKRIAD
ISQVYTQNAEMRPLGCCMIVIGVDEELGPQVYKCDPAGYYCGFKATAAGVKQTEATSFLE
KKVKKKLDWTFEQTVETAITCLSTVLSIDFKPSELEIGVITTADPKFRILSESEVDTHLV
SLSERD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggggtcaagtgcggggtttgatcggcatatcactatcttttcaccagaggga
agactctaccaagttgaatatgctttcaaggctattaatcagggtggactcacatcagtg
gcagtcagagggaaagactgtgcagtggtggtcacacagaaaaaagtaccggacaagctg
ctggatgcggccactgttactcacctcttcagaatcacagagaacattggctgtgttatg
tcagggatgaccgctgacagcagatctcaagtccagagggccagatacgaggcggccaac
tggatgtacaagtacggttatgagattccagtggacatgctctgcaaaaggattgcagac
atctctcaggtttacactcagaatgctgaaatgaggccactgggctgctgcatgattgtg
attggtgtagacgaagagttgggtccacaagtgtacaaatgtgacccagccggctattac
tgtgggttcaaggccacagcagcaggggtcaagcaaacagaagccaccagcttcctggag
aagaaagtgaagaagaaactagactggacctttgagcaaactgtggagacggcaatcacc
tgtttgtcaacggtgctttcaattgattttaaaccctctgagttggaaataggagttatc
accactgcggacccaaagttcaggatcctgtccgagtcagaagtcgatacccacttggtt
tccctgtccgaaagggactga
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integrated database retrieval system
