Alosa sapidissima (American shad): 121711158
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Entry
121711158 CDS
T11137
Symbol
six6b
Name
(RefSeq) homeobox protein SIX6b
KO
K19473
homeobox protein SIX3/6
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121711158 (six6b)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
121711158 (six6b)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
FAM199X
HTH_3
DUF3043
Motif
Other DBs
NCBI-GeneID:
121711158
NCBI-ProteinID:
XP_041950449
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Position
6:11788134..11790519
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AA seq
245 aa
AA seq
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MFQLPILNFSPQQVAGVCETLEESGDIERLGRFLWSLPVAPGACEVLNRNESVLRARAIV
AFHTGNFRELYHILENHKFTKESHSKLQALWLESHYQEAEKLRGRPLGPVDKYRVRKKFP
LPKTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRR
QRDRAAAAKNRLQQQVMSNGSVRSLTGEDGAVDRLGTASSPEASLSSKAAASAISITSSD
SECDI
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaattgccaatcttgaatttcagtccccagcaggtcgcgggggtatgcgagact
ttggaggagagtggggacatcgaacgcctcggccggttcctctggtcgctgccggtcgcc
cctggtgcctgcgaggttctcaaccgaaatgagtcggttttgcgggcacgggccatcgtg
gcttttcacactgggaatttccgtgagctctaccacattctggagaaccacaagttcacc
aaagagtcgcattccaaactgcaagcgctttggctggagtctcactaccaagaggcagag
aagctccggggtcgcccgctagggccagtggacaaatacagggtacggaagaagttccca
ctacccaaaacaatttgggatggtgaacaaaagactcattgcttcaaagaaaggacccgg
catttgctccgagagtggtacctccaagacccttacccaaaccctagcaaaaaaagagag
ctcgcacaagccacaggactcactcccacccaagtcggaaactggtttaaaaaccggaga
caaagggacagagccgcggcggccaaaaacaggttacaacaacaagtgatgtccaatggc
tcggttcgatccctgactggagaagacggcgcagtggaccgtctcggaaccgcgtcgagc
cccgaagcaagtctgtcgagcaaagcagccgcgtcggctatctccatcacttcgagcgac
agcgaatgtgacatctaa
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integrated database retrieval system
