Alosa sapidissima (American shad): 121711448
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Entry
121711448 CDS
T11137
Symbol
chrna2b
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121711448 (chrna2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121711448 (chrna2b)
Ion channels [BR:
asad04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121711448 (chrna2b)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
121711448
NCBI-ProteinID:
XP_041950994
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Position
6:complement(12304472..12316183)
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AA seq
618 aa
AA seq
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MERVQCYLFSVRTTLLCLLLYETTFIGWTYEKTHSHAEDDLFKKLFIGYNKWSRPVPNTS
DVVIVKFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWKPSDYDNVTSIRVPSELIW
VPDIVLYNNADGEFAVTHMTKAHLFYTGQVRWVPPAIYKSSCSIDVTFFPFDQQSCKMKF
GSWTYDKAKIDLERIENTVDLKDYWESGEWAIINAVGTYNTKKYDCCHEIYVDITYYFII
RRLPLFYTINLIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPST
SLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHHRSPGTHKMPHWVHAVFLDLIPRWLFMQ
RPAPDGRRRRRLLLLRQHQRHQCHQQQHHTHDDGDDLHHHHHSNWHHQQHQQHQHQPQHL
QQTHARHGLRLPGLPSAMAAAAGPHLSTSSTWGGRVGDDSHRHCYYEDLELGTLSTAFSL
SFRPQSPRPPGSTPPPMPKHNNPHPGRMDVGVGLVGRQQGQGQVRGNSTTSTQRPDKGDK
AASEASGGFLLSPSVQRALEGVHYIADHLRAEDADFSVKEDWKYVAMVIDRIFLWMFIIV
CLLGTIGLFLPPWLAGMI
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgtccaatgctacctgttctcggtgaggacaactctactctgcttactcctc
tacgagacaacttttataggatggacgtatgagaagacccactcacatgcagaggacgac
ctcttcaagaagctcttcataggctacaacaagtggtccagacccgtgcccaacacgtct
gacgtggtcatcgtcaagttcggcctctccatagcccagctcatcgacgtggacgagaag
aaccaaatgatgaccacaaatgtgtggctaaaacaggagtggaatgattacaaattgaga
tggaaaccatccgattacgacaacgtcacgtccatcagagtgccttcagagctcatctgg
gtacctgacattgttctgtacaacaatgctgacggcgagtttgctgtgacccacatgacc
aaagctcacctgttctacacgggccaggtgcgctgggtgcccccagccatctacaagagc
tcctgcagcatcgacgtcaccttcttccccttcgaccagcagagctgcaagatgaagttc
ggctcgtggacctacgacaaggccaagatcgacctggagcgcatcgagaacacggtggac
ctgaaggactactgggagagcggcgagtgggccatcataaacgccgttggcacgtacaac
accaagaagtacgactgctgccacgagatctacgtggacatcacatactacttcatcatc
cgccggctgccgctgttctacaccatcaacctgatcatcccgtgcctgctcatctcctgc
ctgaccgtgctggtgttctacctgccgtccgactgcggcgagaagattacgctgtgcatc
tccgtgctgctctcgctgaccgtcttcctgctgctcatcaccgagatcatcccgtccacg
tcgctggtgatcccgctcatcggcgagtacctgctcttcaccatgatcttcgtcacgctc
tccatcgtcatcaccgtgttcgtgctcaacgtgcaccaccgctcgccgggcacgcacaag
atgccccactgggtgcacgccgtcttcctggacctcatcccgcgctggctcttcatgcag
cggcccgcgccggacgggcgtcggcggcgccgcctcctgctgctgcggcaacaccagcgc
caccaatgccaccagcagcagcaccacacccacgacgacggcgacgacctccaccaccat
caccatagcaactggcatcaccagcagcatcagcaacatcagcatcagccgcagcacctt
caacagacccatgcccggcacggactgaggctgcccggcttaccgtcggccatggccgcc
gccgccggcccccacctgagtacctcgtccacctggggagggagagtgggcgacgattcg
cacaggcactgctactacgaggacctggagctgggcacactctccacggccttctccctc
tccttccgaccgcagtcacctcggcccccgggctccacgccgccgcccatgcccaaacac
aacaacccccacccgggccggatggacgtgggggtggggttggtgggcagacagcagggc
caggggcaggtcagggggaacagcactacctccactcagcggcctgacaaaggggacaag
gcagcatcggaggccagcggagggttcctgctgtcccccagcgtgcagcgggcactggag
ggggtccactacatcgctgaccacctgagagcagaggacgccgacttcagtgtgaaagaa
gactggaagtatgttgccatggtgatcgacagaatcttcctgtggatgtttattattgtg
tgcttgcttggaacaattggactgttcttaccaccctggcttgcgggcatgatctaa
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