Alosa sapidissima (American shad): 121711482
Help
Entry
121711482 CDS
T11137
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1 isoform X1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03410
Base excision repair
asad04210
Apoptosis
asad04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121711482 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121711482 (parp1)
04217 Necroptosis
121711482 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asad03032
]
121711482 (parp1)
03036 Chromosome and associated proteins [BR:
asad03036
]
121711482 (parp1)
03400 DNA repair and recombination proteins [BR:
asad03400
]
121711482 (parp1)
Enzymes [BR:
asad01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
121711482 (parp1)
DNA replication proteins [BR:
asad03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
121711482 (parp1)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
121711482 (parp1)
DNA repair and recombination proteins [BR:
asad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
121711482 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
121711482
NCBI-ProteinID:
XP_041951051
LinkDB
All DBs
Position
6:complement(37645705..37669038)
Genome browser
AA seq
1017 aa
AA seq
DB search
MSKMADTQDDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSC
FWQRAAVQTAGDISGFSDLRWEDQEKVKKAIESGGATGGKGDQKGGAKGEKTLNDFAVEY
AKSNRSTCKGCEQKIEKDQIRVSKKTVDAEKPQLGLIDRWYHTACFVSRRQELAFKAEYS
AAQLKGFANLKAEDKEELKKRLPAVKSEGKRKGDEPDGEGAPKKMKKEAEEEEKKLETQL
KDQSQLIWGIKDKLKKYCSTNDMKELLIANGQDVPSGESNIVDSLADCMAFGALKPCETC
QGQLVFKSDAYYCNGDISAWTKCVFRTLTPNRKDWLTPKEFHEVPFLKKFKFKRQDRVYP
KDAPPAPSAPTASAGAPSALSKALPESPPADKPLTGLKLLAVGKLSKNKDDVKAAVEDLG
GKITGTASKATLCISSRKEVEKMSKKMEEVKEACVRVVSEDFLTDIKSSGKALQELISLH
AISPWGAEVKLEAPAPSAASKSTGAPVAKSAGRVKEEEGGSKSKTMKLTVKGGAAVDPDS
GLENCAHVLDQNGKIYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTTIG
GNKLDKFYDKNSAMDNFRNVYEEKTGNSWTSTNFTKYPNKFYPLEIDYGQDEEAVKKLTA
SAGTNSKLAKPVQELIRTIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQNAYALLSEVQ
QAVSDSASESTILDLSNRFYTLIPHDFGMKKPPLLNNLDYIQAKVQMLDNLLDIEVAYSL
LRGGAEDNKKDPIDINYEKLKTKIEVVDQSSHEAQLIQQYVKNTHAATHNTYTLEVEEIF
KVVREGEYQRFRPFEELHNRQLLWHGSRTTNYAGILSQGLRIAPPEAPVTGYMFGKGVYF
ADMVSKSANYCHTSQADPVGLILLADVALGNMHELKKASHITKLPKGKHSVKGVGRTAPD
PSATVKLDGVDVPLGKGSTTNIEDTSLLYNEYIVYDVAQVNLKYLLKIRFNYQTSLW
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatggcagatacacaggacgacaagctctacaaggctgagtatgcgaaaagt
ggacgcgcatcttgcaagaaatgcaaagaaaacattgcgaaggactcattgcgaatggct
atcatggtgcagtcgcccatgttcgacggtaaggtgccgcactggcaccacttctcgtgc
ttctggcagcgggcggcggtgcagacggccggcgacatctcgggcttcagcgacctgcgc
tgggaggaccaggagaaggtcaagaaggccatcgagagcggcggagccacgggagggaag
ggcgatcagaaggggggagccaaaggggagaagacgctgaacgacttcgcggtggagtac
gccaagtccaacaggagcacctgcaagggctgcgaacagaagattgaaaaggaccagatc
cgcgtgtccaagaagacggtggacgcggagaagccgcagctgggcctgattgaccgctgg
taccacacggcctgcttcgtgagccggcggcaggagctggccttcaaggccgagtacagt
gccgcgcagctcaaaggcttcgccaacctcaaggccgaggacaaggaggagctcaagaag
agactgcccgccgtcaagagtgaagggaagaggaagggcgatgagccggatggagagggc
gctcccaagaagatgaagaaggaggccgaggaagaggagaagaagctggagacgcagctc
aaggaccagtcccagctgatctggggcattaaggacaagctgaagaagtactgctccacc
aacgacatgaaggagctgctcattgccaacgggcaagacgtgccctcgggagagtccaat
atcgtggacagcctggccgactgcatggcgtttggcgctctgaagccgtgcgagacgtgc
cagggccagctggtgttcaagagcgacgcgtactactgcaacggtgacatctccgcctgg
accaagtgtgtgttcaggaccctcacacccaaccgcaaggactggctcacgcccaaagag
tttcacgaggtgcccttcctgaagaagttcaagtttaagcggcaggatcgcgtctacccc
aaagatgcccctcctgccccttcggcccccactgcctccgcaggggctcccagcgccctc
tccaaagccctgccagagtcgccccctgcagataagcccctgacgggtctgaagctgctg
gccgtggggaagctgtcgaagaacaaggacgatgtcaaggctgcagtggaggacctgggg
ggcaagatcaccgggacggccagcaaggccacgctctgcatcagcagcaggaaggaggtg
gagaagatgagcaaaaagatggaggaggtgaaggaggcgtgtgtgcgcgtggtgtcggag
gacttcctgacggacatcaagtcctcgggcaaggccctccaggagctcatctccctgcac
gctatctccccctggggggctgaggtcaaactcgaggccccggctccgtctgcggcctcc
aagtccaccggagcccctgtggccaagagtgcaggcagggtcaaggaggaggaggggggc
agtaagtctaagactatgaagctgacggtgaagggtggagcagcggtggacccagactct
gggctggagaactgcgctcatgtgctggaccagaatgggaagatctacagcgccaccctt
ggcctggtggacatagtgcggggaaccaactcctactacaagctgcagctgctggaggac
gacgtgcagaagaggtactgggtgttccgatcatgggggcgtgttggtaccactattgga
ggaaataagctggacaagttctacgataagaactctgcaatggacaacttccgcaacgtc
tacgaggagaagaccggaaactcatggacctccaccaacttcaccaagtaccccaacaag
ttctaccccctggagatcgactacggccaggacgaggaggcggtgaagaagctgacggcc
agtgcgggcaccaattctaagctggccaagccggtccaggagctcatccgcaccatcttc
gacgtggagagcatgaagaaggccatggtggagtttgagatcgacctgcagaagatgcct
ctgggaaagctgagcaagagacagatccagaacgcctacgcactcctcagcgaagtccag
caggcggtctcagacagtgcttcagaatccaccattttggatctatccaatcgcttctac
actctcatcccccacgactttggcatgaagaagccgcctctcctcaacaacctcgactac
atccaggccaaagtccagatgctggacaacctcctggacatcgaggtggcctatagcctg
ctgcgtggaggggccgaggacaacaaaaaggaccccatcgacatcaactacgagaaactc
aaaacaaagatcgaggttgttgatcagtcttcacatgaagctcagctcatccaacagtat
gtgaagaacacacacgcggccacacacaacacctacactctggaggtggaggagatcttt
aaggtggtgcgggagggcgagtaccagcgcttccgtccgttcgaggagctgcacaaccgc
cagctgctgtggcacgggtcacgcaccaccaactacgccggcatcctgtcgcagggtctg
cgcatcgcgccacccgaggctccagtgacgggttacatgtttggtaaaggtgtgtacttc
gccgacatggtgtccaagagcgccaactactgccacacctcccaggctgacccggtcggt
ctcattctcctggccgacgtcgccctcggcaacatgcatgagctgaagaaggcatcacac
atcaccaaattacctaagggtaaacacagtgttaaaggtgttggccgaactgccccggac
cccagtgccacggtgaagctggatggggtcgacgtgcctttgggcaaaggctccaccacc
aacatcgaggacaccagcctgctgtacaatgaatacattgtatacgacgtcgctcaggtg
aacctcaagtacctgctgaagatccgtttcaactaccagacgtccctgtggtga
DBGET
integrated database retrieval system
