Alosa sapidissima (American shad): 121711538
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Entry
121711538 CDS
T11137
Symbol
tulp4a
Name
(RefSeq) tubby-related protein 4a isoform X1
KO
K24720
tubby-related protein 4
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
asad04990
]
121711538 (tulp4a)
Domain-containing proteins not elsewhere classified [BR:
asad04990
]
Other domain-containing proteins
Tubby family proteins
121711538 (tulp4a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121711538
NCBI-ProteinID:
XP_041951137
LinkDB
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Position
6:complement(27926449..27960374)
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AA seq
1859 aa
AA seq
DB search
MFAAVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRKRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRTTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDTDGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHILLHESDGIVSMAWNYPNFLVEDSSESDTDSDDYAPP
QVHSLRPLLTVCFTSGDINLMNNYDDLSPIHIRSGLKDVVVQWCSQGDLLAVAGMERHVV
SSDPACAPSARNATVKFYNVRGEHVYTLDTPAQRPITTLCWGHRDSRLFLACGPALYVVR
VEHRVASLQLLCQQGIASAVREEKDVAKLTMPSRLGTYVTTAFAPTIKPPIPDPNNMRDF
VSYPTSGNERLHCTMKRTEDNPEVGGPCYTLYLEYLGGLVPILKGRRISKLRPEFVIMDP
KTDGKTGGCCVEHGCKRDEVYGNTLISSMIDSCNCSDSSDIELSDDWVGKKSPKISRGSK
SPKLPRINIDPRKSPKLSRATQEISRSPRLPIRKPSIGSPSLTRREFPLDDITQHNYLAQ
VTSNIWGTKFKIVGLATFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISMDYINLPVF
SPNVFSEDEDDLPVTGPSGVADDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQN
VQLDILTNPMATAAAVAAAAAASDQGQDSVLTAQYTVPTRYSSPGQVIFGGLEVGRLLVG
PALSHQQQQQQQQQQQQQQQQQQHHHQLQPHQIQQLQQLQQQQQQQQQQQQQHQQLQQQL
QQQQQHQHQMLQHQQMQQHLHQMQQQQQIQQQQQIQQLQQLQQHQQQLQQHQQMQQQQMQ
QQQLQQHQQQIQQQQLQQQLQQQMQQQQLQQQHQQMQQQQQQQLQQQQQIQQQLQQQQQQ
HQQMQQQQLQQQQQQQLQQHPIQIQIPPNPLPQGQSPGPLLQLQQAMLQVPHSPSDHAAV
ERVEHEHLLKIKPTRSTPQLAEGDAVVFSAPLELSKMNPPPPYPGTVAAAVAAAAAAASA
ASAAGSAVSGGAGGVSGTPPPVDLCLKKGEFTLYPPGAQGVQYPTPLGYERITTFDSSGN
VEEVCRPRTRLVCNQNVYTLQGPGSSATLRVTSSSASAASADGKKVQLPYASATLNRLTV
PRYSIPSGDPPPYPDPANQTNSGRTPGQRLDSSLIHATLRRNSREAALKVSQMLDPQRTL
PTKAKASSSLTATYQQRVPTALYTCSQCSSNNNVSGAAGSSNGIAGGTIIRQDFPPTGSG
APHSTVIVHSNSASPLPSQSSYNLLSLDGSSSSGGATGGGSGVGRDRADYVNTAFTEDEA
LSQSLRHLAVGTEVGTLTVKRPPPYQWDPSATEEIWIPQERTTTLAPSPGPPGPHKPPPL
ILSPAQHLDVSRVPFVLSPKSPTSPNAASFQLAGGYPITLPYSTATGYSGAQLQAMQASP
RPCSPKEVVAPVPFSQQDPPLVLSPGYAQNLASLACCPLPPMYPSANSCAGVPMTPIALH
PWGTYNPCPPMSSPAGTLPPKASHMVMEKQVLSPPPPPPPSQTADLQGHLGSSEASAETG
EGFQEVLSLNESPVPQRADKFGKKSRKRLDNGRADETNVPAITEGGSKSKKDGGRALGDF
NSLISSPRLGGRDKKKPKGQKEQLKAKKLSKATTNEFQDSSESEPELFISGDELLNQSQN
SKKGWKTKRSLRAGACELDEIKCRKANEKEDRSLGSQGFVYVMANKQPLWNEATQVYQLD
FGGRVTQESAKNFQIELEGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVALANVTQRLK
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcggcggtcgagcatggccccgtgctctgcagcgactcgaacatcctctgcttg
tcctggaaagggcgcgtgccgaagagcgagaaggagaagccggtgtgtcggaagcgctac
tatgaggagggctggctcgcgacggggaatggccggggtgttgtaggagtgacgttcact
tcaagccactgcagaagggaccggacgacacctcagagaataaacttcaatttgagagga
cacaacagtgaggtggttttagtccgctggaacgagcccttccagaagttggccacctgc
gacactgatggaggcatcttcgtgtggatccagtatgaaggccgctggtctgtggagcta
gtcaacgaccgtggagctcaggtcagcgacttcacgtggtcacatgatggcacacaggcg
ctcatctcctaccgcgacggcttcgtgctggtgggctctgtcagcggtcagagacactgg
tcgtccgagatcaacttggagagtcagatcacctgtggcatctggacccctgatgaccag
caggtgctgtttggcacagctgatggtcaggtgatcgtgatggactgccacggccgcatg
ctggcccacatcctgctccacgaatcagacggcatcgtgagcatggcctggaactacccc
aacttcctggtggaggatagcagcgagagcgacaccgattcagatgactatgctccccca
caggtgcacagcctgcggccgctgctaacggtctgcttcacctcgggagacatcaacctg
atgaataactatgacgacctctctcccatacacatccgctcagggctaaaagatgtcgtg
gtacagtggtgctctcaaggtgacctgctggctgtggctgggatggagagacacgtagtg
tcttctgaccccgcctgcgctccctcggcaaggaacgccacagtaaaattctacaacgtc
cgcggggagcacgtctacaccctggacacacctgcacagcgccccatcaccacgctgtgc
tggggccaccgtgactcgcgcctgttcctggcgtgtgggccagcgctgtacgtggtgcgt
gtggagcaccgtgtggccagcctgcagctgctgtgccagcagggcatcgccagcgccgtg
cgtgaggagaaggacgtggccaagctcaccatgccctcccgcctcggaacctacgtcacc
accgcctttgcacccaccatcaagccccctattcccgatcccaacaacatgcgggacttt
gtcagctaccccacgtccgggaacgagcgcctgcactgcaccatgaagcgcacggaggac
aaccccgaggtggggggaccctgctacaccctctacctggagtatctaggcggcctcgtg
cccatcctcaagggccgcaggatcagcaagctccgtccggaattcgtcatcatggacccc
aagaccgatgggaagaccggtgggtgttgtgtggaacatgggtgcaagagagatgaagtc
tatggaaacactttgatctcctccatgattgacagctgcaactgttccgactccagtgac
attgagcttagtgatgactgggtgggcaagaaatcaccaaagatatccaggggaagcaag
tcacccaaactaccgcggatcaatatagatccccgaaagtccccaaagctctcccgtgcc
acacaggaaatatcacgatcaccacggttaccaatccggaaaccctccattggttctccg
agcctgacccgcagagagtttccacttgatgacatcacacagcataattaccttgctcag
gtgacatctaatatatggggaaccaagttcaaaattgttgggcttgccactttcttgcca
acaaatcttggcgcagtcatctacaagacaagcctgcttcatcttcaacctcgtcaaatg
accatctacctgcctgaggtgagaaagatctccatggactacatcaatctgccagtgttc
agccccaacgtcttcagcgaggatgaggatgacctccctgttaccgggccctcaggagtg
gctgacgacaaccctccttgcactgttaatatccccattgcccccattcacagccctgct
caagccatgtctccaacccaaagcattgggctggttcagtcactcttagccaatcagaat
gtccagttggacatcctgaccaatcctatggccactgcagcagcagtggcggcggcagca
gcagcatctgatcaaggccaggattctgtgctgacggctcagtacactgttcccaccaga
tactccagccctggtcaggtgatctttggggggctggaggtcggaaggcttctggtcggt
ccagcgctgtctcatcagcagcaacagcaacaacaacagcagcaacaacaacagcaacaa
cagcagcagcaccaccaccaacttcaaccgcatcaaattcaacaacttcagcagctacaa
cagcaacaacaacagcaacagcagcagcagcaacaacatcaacaattacagcagcaactt
cagcagcaacagcaacaccaacatcagatgcttcagcatcaacaaatgcagcagcatctc
catcaaatgcaacaacagcagcaaatacagcagcaacaacagatacagcaattacagcag
ctgcaacagcatcaacaacaactacaacagcatcaacagatgcagcagcaacagatgcag
cagcaacaactgcagcaacatcagcagcagattcagcagcaacaactccagcagcagcta
caacaacaaatgcagcaacagcaactacaacagcaacatcaacagatgcagcaacagcag
cagcagcagctacaacaacagcaacagattcagcagcagctacaacagcagcagcagcaa
caccaacagatgcagcaacagcagcttcagcaacaacaacagcagcagctgcagcagcac
cccattcagatccagatcccacctaaccccctacctcagggccagtctcccggtccactc
cttcagctccaacaggcgatgctacaggtgcctcactctcccagtgaccacgcggctgtc
gaacgagtggagcacgagcacctgttgaagatcaaacccacacgctccactcctcagctg
gctgaaggtgatgctgtggtcttcagtgctcccttagagctcagcaaaatgaacccgcct
cccccttacccggggacggtggcggccgcagtcgcggcggctgcagctgctgcctcggcc
gcctcggctgccgggtcggccgtctctggcggggcagggggggtgagtggaacgccgccc
ccagtggacttgtgcctgaagaaaggggagttcacgctgtaccctcccggtgcccagggg
gtgcagtacccaacgccgctgggctacgagaggatcacaacgtttgacagcagtggaaac
gtagaggaggtttgccgcccgcgcacgcggctcgtgtgcaaccaaaatgtttacactctg
cagggcccaggaagctctgccaccctcagggtcacttcttcctccgcttcggccgcgtcc
gccgacggcaagaaagtgcaactcccgtacgcgtccgccaccctcaatcgcctcactgtg
cccagatactccataccaagcggagacccacccccttacccagatccggcgaatcaaaca
aactcagggcggaccccaggccagaggctcgacagcagcctcatccacgccaccttgcgg
aggaacagccgcgaggctgcactcaaagtgtcccagatgttggatcctcagcgcactctc
cccaccaaagcaaaagctagcagctcgctcacagccacttaccagcaacgcgtacccacg
gcgctttacacgtgtagccagtgcagcagtaacaacaacgtgagtggggccgccggtagt
agcaacggaattgctggcggcaccatcatccgacaggactttccgcccacaggaagtggt
gcgccacacagcaccgtcatagtgcattcgaacagcgcctcgcccctcccttctcagtcg
tcttacaacctgctgagtttggatgggagtagcagcagtggtggtgcgacgggtggcggg
agtggcgttggtcgagacagggcggactacgtgaacactgccttcacggaggacgaggca
ctgagtcagtcactgaggcacctggcggtgggtaccgaagtgggtacgctgactgtcaaa
cgtccgcccccgtaccagtgggacccgtcggccaccgaggagatctggatcccacaggag
aggaccaccacactggctccttcgcctggcccaccgggcccgcataagccacctcccctc
attctcagccctgcccaacaccttgacgtgtctcgggtgcccttcgttctctcccctaag
tctcccacctccccaaatgccgcctctttccagttggcagggggatatccgatcactttg
ccctactcgacagctacaggttacagtggggctcagcttcaggccatgcaggcatcccca
cggccttgctcccccaaagaagtggtagcccctgtgcccttttcccagcaagacccacca
ctggtgttgtcgccaggctatgcacaaaatcttgccagtctggcctgctgcccgctaccc
ccgatgtatcctagcgcaaactcttgcgcaggagtccccatgacccccattgccttgcac
ccatggggcacctacaacccgtgcccacccatgtcgagcccagcagggaccctccctcca
aaagcctctcatatggtaatggagaagcaggttctctcccctcctccaccgccaccccca
tcccaaaccgcggacctgcaagggcacctcggatcctctgaggcttctgccgagactggt
gaaggtttccaggaggtgctgtcgctcaacgagagccctgtgccgcagcgagccgacaaa
ttcggcaagaagagtcgcaagaggctggacaacggtcgcgccgacgagacgaacgttccg
gccatcacagaaggcggcagcaagtccaagaaagatggaggccgggccctcggcgacttc
aactccctcatctcgagtcccaggctgggtgggcgggacaaaaagaagcccaagggccaa
aaggagcaattgaaggcgaaaaagctgagcaaagccaccacgaacgagttccaggacagc
tcggagagcgaaccagagctcttcattagtggcgacgaacttctgaaccagagccagaac
agcaagaagggctggaagaccaagaggagcctgagagcaggggcctgcgagctggatgag
attaagtgccgcaaggccaacgaaaaggaggaccgcagcctggggagccaaggcttcgtc
tatgttatggccaacaagcagccactgtggaacgaggccacacaggtctaccagctggat
tttggcgggagagttactcaggagtcggcaaagaactttcagattgagcttgaggggaga
caggttatgcaatttggaaggattgatgggaacgcttacatactggactttcagtatccg
ttctctgctgtgcaagcttttgcagtggccctggccaacgtcacccagagactgaagtga
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integrated database retrieval system
