Alosa sapidissima (American shad): 121711543
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Entry
121711543 CDS
T11137
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asad03400
]
121711543
DNA repair and recombination proteins [BR:
asad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121711543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
121711543
NCBI-ProteinID:
XP_041951150
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All DBs
Position
6:complement(27981542..27992312)
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AA seq
948 aa
AA seq
DB search
MGVTELWSILEPARESVPLYSLTGKTLAVDLSLWVCEAQQVQAMMGKVHKPHLRNLFFRV
SSLTLMGVKLVFVMEGEAPKLKADTMSKRTEMRFGGFQKKAPKPAAAKSTSRGRFNAVLR
ECGEMLDCLGVPWVTAAGEAEAMCAFLDLHGFVDGCITNDGDAFLYGAQTVYKNFNMNTK
DPQVDCYKMSKVQEELHLSRETLVGFAMLLGCDYIPKGVPGVGKELALKLIQSLNGKSLL
QKFREWAAAGVQAQEMAVKKVPHCNVCHHPGSAKAHERSGCTLCDSTHFCEPQDYAVLCP
CDWHRSERLRQANATETTVRKKTLACERFPFTEIIEEFLVNKDKPIQPLRKRKPNLLSMQ
NFALDKMEWPKHYTSEKVLTLMTYTELVNKRHGRDTLSQIQPVGIYKPRVRNGISCFEVI
WKKPEHYAFPDGQETEDQDVVRTVEEEALFCLAYPDIVDLYIKQKEEAVENKNKKKKPRS
KKEKSPDVCDDDVSDLLARMSLKNTPTESTTSHTTAAPARPAEERPEDPSCTEGNQDGTK
KEDTGNQLDVKPNAEKPLSSPLPGPASPAVTSLSTPTLLDKLHLSDIDWEAWSFTTSPSQ
AGSSSKIDQESAERVDTEALGSGMVGLVSDSGSQDGPASNRTELLPENEPCSLRERLLMR
NALKSLSSCRERNECVNLTTDESSEAHPIPLERADSIAVTGHSKADTDHSGTEKSRSVLT
QSQVQSKKPAQLYLSHKAASGCNSEISTLKAVTTSTTAHKAKQLNVGSTNASAKYKFVRT
NKEYAPALLQQTNSDDLTSRKQPKGPDPKPRKVSKPSVCVGPVYSSDDSDVENQRGQRWN
KANKAKSKPTHPTHPKVHNHIPAAAKTASAPQQKPLSVTDPRSEEIPGVSLSERVQQRSR
RAEVEVIDLCLSAPASPLCAALSANDDSVISIESPLPLAQRLKLKFVK
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttacggagttatggtccatcctggaaccagcacgagagtctgtaccattgtac
agcctcactggaaagaccctagcagtggacctcagtttgtgggtctgcgaggcacaacaa
gtccaagcgatgatgggtaaagtccacaaaccacaccttcggaatttgtttttccgagtc
tcgtctctcaccctgatgggtgtgaagctcgtttttgtaatggaaggagaagctcccaaa
ctcaaggcagataccatgagcaaaagaacagagatgcggttcggaggatttcaaaagaaa
gctcccaaaccagcagcagctaagagcaccagcagagggcgctttaatgccgttctcaga
gagtgcggtgagatgctggattgtctgggtgtgccgtgggtgaccgctgccggggaggca
gaggccatgtgtgccttcctggatctgcatggctttgtggatggctgcatcaccaatgat
ggagacgccttcctgtacggcgctcagaccgtttataagaacttcaatatgaacactaag
gatccccaggtggactgttataaaatgtcaaaagtgcaagaggagctccatctctctcgg
gagacccttgtaggctttgcgatgctgcttggttgtgactacatccctaagggtgttcct
ggagttggaaaggagctggccctgaagttgatacagagcctgaacggaaaaagtcttctg
cagaagttcagggagtgggcagctgctggtgtgcaggcccaggagatggccgttaagaaa
gtcccccactgcaacgtttgtcaccatccaggttcagccaaggctcatgagcgtagtggc
tgtaccctgtgtgacagcacccacttctgcgagccacaggactacgctgtgctgtgcccg
tgtgactggcatcgctctgaacggctacgccaggccaacgctaccgagaccactgtcagg
aagaaaactttggcatgtgaaaggttcccttttactgagattattgaggaatttctggtg
aacaaggataaaccaattcagcctctcagaaaaagaaaacctaaccttttgtccatgcag
aattttgcccttgacaaaatggaatggccaaagcactacaccagtgagaaggtgttgacg
ttgatgacgtacacagagctggtgaacaagaggcatggcagagacaccctgagtcagata
cagcccgttgggatatacaagccaagagtaagaaatggaatctcctgctttgaagtcata
tggaagaagccagagcactatgcattccctgatggccaagaaactgaggaccaggatgtg
gtgagaactgtggaagaggaggcgctgttctgtctggcatatccagacattgtggacctc
tatatcaagcagaaggaggaagcagtggaaaataaaaacaaaaagaagaagccgaggagt
aagaaagagaaatctccagatgtctgcgatgacgacgtgtctgatcttctggctcggatg
tcactgaagaacaccccaacggagagcactacgagccacaccacagctgcgcccgccaga
ccggctgaggaacgcccagaggacccctcctgcactgagggaaatcaagatggcaccaag
aaagaggacaccggtaatcaactggacgtgaagcctaacgccgagaagccactgtcgtcc
cctcttcctggaccagcatccccggctgtgacgtccttatctacacccaccctgctggac
aagctgcatctgagtgatattgactgggaggcctggtcattcacgacgtccccgtcccag
gcagggtcgagcagcaagatcgatcaggaatcggcagagcgtgtggacacagaggctttg
gggtcaggtatggtaggattggtctcggactcggggtcacaggatggtcctgcgtcaaac
agaactgaactcttgcctgaaaatgaaccctgttcactacgggaaagactccttatgagg
aacgctctaaaatctctaagttcttgccgcgagcggaatgaatgtgttaacctgacaaca
gatgaatcatcagaggcccaccccattcccctagagagagctgattccatagcagtcact
ggacattcaaaagctgacactgatcattcaggaactgagaaaagtcgatcagttttaaca
cagtctcaggttcagagtaaaaagccagcacagctttatttatctcacaaagctgccagt
ggttgcaactctgaaatctcaacactaaaagctgtcacaacttccactacggcacacaaa
gcgaaacaactgaatgtgggaagcacaaacgcatccgccaagtacaaatttgtgaggaca
aataaagagtatgcccctgctctgttgcagcagaccaacagcgatgatctgaccagcaga
aagcaaccgaaagggcctgaccccaagcctcgaaaggtctcgaagccgagcgtctgcgtc
ggtccggtgtactcgagcgacgacagcgatgtggagaaccagagagggcagcggtggaac
aaggccaacaaagccaaatcaaagcccactcaccccactcaccccaaggttcacaaccat
atccctgctgctgccaagacagcttctgctccccagcaaaagcctttgagcgtgactgat
cccaggtcagaggagatcccaggcgtatcactctctgagcgcgtgcagcagaggagccgg
agagctgaggtggaggtgatcgacttgtgcctctcagctccggcctctccgctttgcgct
gctctgagtgcaaacgacgactccgtcatctccatcgaaagccccctgccccttgcccaa
agactcaaactgaagtttgtgaagtaa
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