Alosa sapidissima (American shad): 121711672
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Entry
121711672 CDS
T11137
Name
(RefSeq) zinc finger FYVE domain-containing protein 1-like isoform X1
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121711672
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
asad01009
]
121711672
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121711672
03029 Mitochondrial biogenesis [BR:
asad03029
]
121711672
Protein phosphatases and associated proteins [BR:
asad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121711672
Membrane trafficking [BR:
asad04131
]
Autophagy
Other autophagy associated proteins
Others
121711672
Mitochondrial biogenesis [BR:
asad03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
121711672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
ANCHR-like_BBOX
AIG1
FYVE_CARP1-2
MMR_HSR1
IBR
DUF429
Motif
Other DBs
NCBI-GeneID:
121711672
NCBI-ProteinID:
XP_041951390
LinkDB
All DBs
Position
6:complement(29540365..29557762)
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AA seq
784 aa
AA seq
DB search
MSGQDKGMSTMLVCQESYACGGSDEAAYECDECGSLQCVRCELELHRQERMRNHDRVRIS
PGHVPFCDSCKGENGSPVNGGRLRAVVRCQGCKINLCLDCQKRTHSGMNKRKHPLTPYPS
AKQPEKNPAAGGDGELEVLKAKLEKVSSFLLVDDKEDMQVQDEDDFVRRLGCGPEDLLKV
VSIFGNTGEGKSHTLNHTFFLGREVFKTSPTQESCTVGVWVALDPIHKVVVVDTEGLLGA
GANQGQRTRLLLKVLAVSDLVIYRTHADRLHDDLFKFLGDASDAYLKHFTKELKATTARC
GLDVPLSTLGPAVIIFHETVHTKLLGSDKPSESAERLLQERFRKLGLFPEAFSSVQYRGT
RTYNPPTDFSGLLRSLEQQLDNNTTRSPRSASVIYKALQALSERFSGEIPEEHMASNSFF
PDEYFTCSSICLSCGSGCKNSMNHLREGLPHEAKHRCRYSPHCDNRIYTCKACYEKGKEV
IVVPKTTASSDSPWFGLAIYAWSGYVIECPNCSVIYRSRQYWYGNQDPVDTVVRTEIQHI
WPGSDGFLKDNNNAAQRLLDGVSFISQSFSELSVKPTKAVTSWLTDQIAPAYWTPNSLIT
KCHKCGEAFQDSDSKHHCRACGEGFCDACSSKARPVPERGWGLAPVRVCDACFQNRGIPE
DISLVVQAELLDAALEEEEGGTLIPRKVGEVVQNTLGAVVTAIDIPLGLVKDAARPAYWV
PDQDIRCCHQCQREFSARLSIHHCRACGQGVCDECSLDRRPVPSRGWDHPVRVCSGCSQK
GGEL
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgagtggacaagacaaaggcatgagcaccatgctcgtgtgccaggagagctatgcctgc
ggaggttcagatgaggccgcttacgaatgtgacgagtgtggtagcctgcagtgtgtgcgc
tgtgagctggaactccataggcaggaacgtatgaggaaccacgatcgagttaggatctcg
ccgggtcatgtgcccttctgtgattcctgtaaaggagagaacggatctcccgtgaacggc
ggacgactacgggcagtagtccgttgtcagggctgcaaaatcaacttgtgcctggattgt
cagaagcgcacccacagcggtatgaataaacggaaacatccgcttacaccgtatccctct
gccaaacaaccagagaagaaccccgcagcaggtggtgatggagaactggaagtgcttaaa
gccaaactagagaaagtctccagcttccttctggtggatgacaaagaagatatgcaggtg
caggatgaagatgactttgtgaggaggttgggctgtgggccagaggatctcctgaaagtc
gtgtccatctttggcaacaccggagagggcaagtcccacactctcaatcacaccttcttc
ctgggccgggaggtcttcaagacatcccccacccaggagtcctgcacggtgggggtctgg
gtcgccctggacccaatccacaaggtggttgttgtggacacggaaggccttctgggtgcc
ggggccaatcaagggcagcgcacacggctgctgctgaaggttctggccgtgtcagacctg
gtcatctaccgcacgcatgccgaccgtctccacgacgacctcttcaagttcctgggcgac
gcctcagacgcgtatctcaagcactttaccaaggagctgaaggccaccacggcgcgttgc
ggactggacgtgccgctgtccacgctgggccccgcagtcatcatattccacgagactgtc
cacaccaagctcctgggctcagataagccgtctgagtcggccgagaggctgctgcaggaa
cgtttccggaagctgggcctgttccccgaggcgttcagctctgtccagtaccgcggcacg
cgcacctacaacccccccaccgacttcagcggcctgctgcgcagcctagagcagcagctg
gacaacaacactacccgctcgcctcgctccgccagtgtcatttacaaggctttacaggcc
ctgagtgaacgcttcagtggggagattcccgaggagcacatggcgagcaactccttcttc
cctgacgagtacttcacctgctccagtatctgtcttagttgtgggtcgggctgcaagaac
agcatgaaccacctgagggagggcctgccgcacgaggccaagcaccgctgccgctactcc
cctcactgtgacaaccgcatctacacctgcaaggcatgctatgaaaagggcaaggaggta
attgttgttcccaaaacaacagcatcctctgactccccctggtttggtctggctatttac
gcctggtccgggtacgtcatcgaatgccccaactgctcagtcatctaccggagcaggcag
tactggtacggaaaccaagaccccgtggacacagtggtccgtacggagatccagcacatc
tggccagggtctgacggctttctcaaagacaacaacaatgctgcccagcgactcctggat
ggcgtgagcttcatatcccagtcgttctccgagctcagtgtcaagcccaccaaagcagtc
acttcctggctcaccgaccagattgccccggcctactggacacccaactccctcatcacg
aaatgtcataaatgtggcgaggcgttccaggacagcgactccaagcaccattgccgtgcc
tgcggagaaggcttctgtgacgcctgctcgtccaaggcccggcccgtgccagagagaggc
tggggactcgctccagtgcgggtctgtgacgcctgcttccagaaccgtggcatcccagaa
gatatttctttggtcgttcaagcagagctactggacgcagctttggaggaggaggaaggg
gggacactgatcccaaggaaagtgggagaggtggtgcagaacacactgggagccgtggtt
accgccatagatatccctctgggcctggtgaaggatgccgcccggcctgcttactgggtg
cccgaccaggacatacggtgctgccaccagtgccagcgggagttcagcgcccgcctctcc
atccaccactgccgggcatgcgggcagggcgtgtgcgacgagtgctccctggaccgccgg
cctgtgccctctcgtggctgggaccacccggtgagggtctgcagcggctgcagccagaag
ggaggggagctctaa
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