KEGG   Alosa sapidissima (American shad): 121711714
Entry
121711714         CDS       T11137                                 
Symbol
riox1
Name
(RefSeq) ribosomal oxygenase 1
  KO
K16914  protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69]
Organism
asad  Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:asad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:asad03009]
    121711714 (riox1)
   03036 Chromosome and associated proteins [BR:asad03036]
    121711714 (riox1)
Enzymes [BR:asad01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     121711714 (riox1)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     121711714 (riox1)
    1.14.11.79  protein-L-histidine (3S)-3-hydroxylase
     121711714 (riox1)
Ribosome biogenesis [BR:asad03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    121711714 (riox1)
Chromosome and associated proteins [BR:asad03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121711714 (riox1)
SSDB
Motif
Pfam: RIOX1_C_WH JmjC_2 Cupin_8 Cupin_1
Other DBs
NCBI-GeneID: 121711714
NCBI-ProteinID: XP_041951466
LinkDB
Position
6:complement(16398982..16404121)
AA seq 552 aa
MLVTPKTENMERKHVSAFALYQSAIPPSNPLNEVLPVKKKKRKLQDGLPIVKSKKIRKKS
GAVRNGLQTKKKDKQETMLNDEEQQTREMAGDTTSLHTLLDSLTKVNNSSERASKLFQWF
VHPIPSKSFFRDTWEKKPLLIKRQKQDYYKGLFSTAEFDRILRDDNVQFGVNLDVTSYIN
GKRETHNPPGRALPYTVWDYYESGCSLRMLNPQAFSSTVWNVLSILQELFGSMAGANVYL
TPAGTQGFAPHYDDIEAFVVQLEGKKHWRVYNPRSEDEVLPVVSSPNFSQGEIGKPILDV
VLEAGDLLYFPRGFIHQGDCLPDAHSLHITVSSYQKNSWGDLLTKLVPAAVEIAMEEDVE
FRKGLPLDYLSYMGVQNSDKEDPRRAEFLSHIGSLMKKLVGYAPVDAAVDQKARGFLHDC
LPPLLTPAEKASSVYGAPARWEDGEALGLTVHVRQQTRIRLIRAGIARLCSDGEEVSLYH
TAENSRVYHKEELKSFEIKPEHTDAMEFLLHSYPKFVTVSSLPCDTAEEKRSLADLLFEK
GLIHTADPLKSE
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgttggtgacgccgaagactgaaaacatggagagaaaacatgtgtcggcctttgcattg
tatcagtccgcaatccccccttcgaatcccctaaatgaggttttgccggtgaagaaaaag
aagaggaaactgcaggatggccttccaatcgtaaaatccaaaaagatcaggaagaagagt
ggtgcagtacggaacggtttgcaaacaaagaagaaagataagcaagagacgatgctgaat
gatgaagaacaacaaaccagagaaatggcaggtgacaccacatctttgcacacccttcta
gacagcctcaccaaagtcaataacagcagcgaaagggcaagcaagctgtttcagtggttt
gtccatccaataccctccaagagcttttttagggatacatgggagaaaaaacctctgctg
attaaacgccagaaacaagattactacaaaggactgttctccacagcagagtttgacaga
attctgagagatgataacgtccagtttggggtgaacctcgacgtcactagttacattaat
ggaaaacgagagacccacaaccctccagggagggcactgccctacacagtgtgggattat
tacgagagtggctgctccctgaggatgctgaacccccaagcattctcctccaccgtctgg
aacgttctctctatcctgcaggagctctttggtagcatggctggtgccaacgtgtatctg
acgccggcaggcacacagggctttgctccacactacgatgacattgaggcctttgtagtc
cagctggagggcaagaagcactggagagtgtacaaccctcggtctgaagatgaggtgctg
ccagtggtatcaagtcccaacttcagccagggtgagattgggaagcccattcttgatgtg
gtgctggaggctggagacctgctctacttcccccgtgggttcatccaccagggcgactgt
ctgccagatgcccactcccttcacatcaccgtctcctcctaccagaagaacagctggggt
gacctgctcaccaagcttgttccagcagctgtggagattgcaatggaggaggatgtggaa
ttccgtaaaggtctccccctggactatctgtcgtacatgggggttcagaattctgataag
gaggatccccgtcgagcagagtttctgagtcatattggctctttaatgaagaagctagtg
ggttacgcacctgtggacgctgcggtggaccagaaggccagaggctttttgcatgactgc
ttaccacctctactcactccagctgagaaggccagcagtgtttatggagccccggcccgc
tgggaggatggcgaggcgttgggcttgaccgtccacgtgagacaacagaccaggatccgc
ctcatacgtgcaggaatagcaaggttgtgcagtgatggagaagaggtctccctttatcac
acagcagaaaactcccgggtttaccacaaagaagagctcaagtcctttgaaataaaacca
gagcacacagatgccatggagtttctgcttcactcgtatcccaagtttgtcaccgtttct
agtttaccatgcgatacagcagaagaaaagcggtcattggcagatctgctgtttgagaag
ggattgatacacacggcggaccctctgaagtcagagtga

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