Alosa sapidissima (American shad): 121711786
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Entry
121711786 CDS
T11137
Symbol
emilin1a
Name
(RefSeq) EMILIN-1a
KO
K24246
emilin
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
asad04990
]
121711786 (emilin1a)
Domain-containing proteins not elsewhere classified [BR:
asad04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
121711786 (emilin1a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EMI
C1q
Collagen
Baculo_PEP_C
DUF16
Sec10_N
DUF1664
DUF948
Tektin
FKBP15
Zw10_N
Apolipoprotein
MscS_porin
TMP_3
MbeB_N
Cnn_1N
Fzo_mitofusin
Sec3_CC
Fez1
Motif
Other DBs
NCBI-GeneID:
121711786
NCBI-ProteinID:
XP_041951560
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All DBs
Position
6:complement(37150664..37164502)
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AA seq
1057 aa
AA seq
DB search
MAVVVYLLLAFAFPGCMSAGGYGPRYGQLADYGQLRSVAQNGLRAASRHRNWCAYVVTKT
ISCVMEDGVETYVKPDYQRCAYGQCSRVVAYRTYRRPKYKVAYRMATEMEWKCCHGYSGD
DCSEGPSGGTEVQTGGGGTHPSQTGHGTEGGQQGGEGRGDSDKMRQLEEKIESLTKDLYN
LQSTMHGMSERLHEESRRGGQSGGRNPADAAQPLIKETIHSIQAKLDHLDNMTRVHDRTL
TDINNHLVNGNGGGNELDSGSDRYSTLKEEILRELEERVALSCSACHAGVDELRRQQQED
RERIRALEKLVSSMDQHYRQSLDIIRQQVMRSQGCCDSLDDLERRLDGVERKVSSTSESY
DILRTRFDKELNRTNGNGGRGSKVTEDKLNTRLRDLERRINGTVKKAEQKCSQTENNLRN
SLQKELGNTRNIYNSRLDEHHSRIGRVEADVRYLQDTVYDHSGRLNHLDNITSIMTSKLT
SAVSLCTESCGPQGRGRQTEDSVKTLQWRVIANEKDIKTFDTRLKDLSMSGDSLMDRVKD
LSRDVNRIKTLTGDNGEHFNRIVNEVEDLARSMEDCSVCSSVQRDLQAFKNATNNALVRW
QGEVTSLRNRVDNDESTCSQVCSNLQEEVGKLKEDVEKCRGQCRTAITDLNARKTDMDGH
HVVTGNLGKDLRSIQGEISGFIQTFSSINDTLKGLGRTVHKHDGTITDLGNTKNQIVTEI
NRLQEDLDDHIEDSKVRFDNLGDNIKRFGSNLVVEMEDCRRSKEGLDKRITKMEDMCGRL
DVVSDSIQKIKDGLNKHVSGLWECVNGLNATVISHGDTIDIHSVDLENIHDQIHGLNSSI
LRILDDVQDFTHQDFVGPPGPPGLQGERGYQGLPGQRGLPGREGPQGKQGLKGPMGPPGL
RGEEGPPGQDAHVPRLSFSAALTRPQTTSGTIIFDKTLVNEGRAYNPRSGMFTAPVKGRY
FFSAILTGHKNVKIEAVLSKSNFGIARGDSAGYQPEGLEKPMAETRLIPGSLVVFNIILP
LEAGDTVCIDLVTGKLAHSVEPLTIFSGVLLYEEKDI
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggcagttgtggtgtacctgctgctggctttcgcttttcctggatgtatgtctgcgggt
ggatacggtcccagatacggtcagctggcagactatggtcagctcaggtccgtggctcag
aatggactacgcgcagccagcaggcacaggaactggtgtgcctacgttgtgacgaagacc
atcagctgtgtgatggaggatggcgtggagacctacgtgaagccggactaccagcgctgt
gcttatggccagtgctcccgcgtggtggcataccggacgtaccgaaggccaaaatacaag
gtggcctacaggatggcgacagaaatggaatggaagtgttgtcatggatactctggtgat
gattgcagcgagggccccagtggagggacggaggtccagactggggggggggggacgcat
ccttcccagacgggccatgggacagaaggtggacagcaagggggagaagggagaggagac
agtgacaaaatgagacagctcgaggagaagattgagagtttgaccaaggacctctacaac
ctgcagtccactatgcacggcatgagcgagcgactgcacgaggagtcccgtcgcggaggg
cagagcggtggcaggaaccccgccgatgcagcccagcctctcatcaaggagaccatccac
agcatccaggccaagctggaccatctggacaacatgacccgcgtccacgaccgcaccctc
acagacatcaacaaccacctggtcaacggcaacgggggcggcaacgagctggacagcggc
agcgatcgctacagcacgctgaaggaggagatcctgcgggagctggaggagcgggtggcc
ctgtcgtgctcggcgtgccacgccggcgtggacgagctcaggcggcagcagcaggaggac
cgcgagcggatccgggcgctggagaagctcgtgagctccatggaccagcactaccggcag
tcactggacatcatccggcagcaggtgatgcgctcccagggctgctgcgactctctggac
gatctggagcgcaggctggacggcgtggagcggaaggtgagctcgacgtcggagtcctac
gacattctccgcacccggttcgacaaagagctgaacaggacgaatggaaatggtgggaga
ggttcaaaggtcacggaggacaagctgaacactcggctgagggacctggagcggcggatt
aacggaacagtgaaaaaggccgagcagaagtgctcccagacggagaacaatctgaggaac
tctcttcagaaagaactcgggaacaccaggaacatttacaacagccgtctggatgagcac
cattccagaataggtagggtggaggcagacgtgcggtatttgcaggacaccgtttatgac
cacagtggacgcttgaaccacctggataacataacatccatcatgaccagcaaactaacg
tcagcggtcagcttgtgcacggaatcctgtggtccacagggcagaggccgccagacggaa
gatagcgtaaagaccctgcagtggagggtcattgccaacgagaaggacatcaagacgttc
gacactcgacttaaggatctctccatgtccggggattcgctcatggaccgcgtcaaggac
ctcagccgtgatgtgaatcgcatcaaaaccctgaccggggacaacggcgaacacttcaac
aggattgtgaacgaggtggaggacctggcgcgcagcatggaggactgcagtgtctgcagc
tcggtgcagagggacctgcaagccttcaagaacgccaccaataacgccctggtgaggtgg
cagggtgaggtcaccagtctgaggaatagagtggacaatgatgagagcacctgctctcag
gtgtgctccaacctgcaggaggaagtggggaagctgaaagaggacgtggagaagtgtcgc
ggacagtgccgtacggccatcactgacctcaacgcccgtaaaacggacatggacggacat
cacgtcgtcactggaaatctaggcaaggacctcaggtccattcaaggagaaatttctgga
ttcatccagacttttagctccatcaatgacacactgaaagggctcggccgcactgtccac
aagcatgatggtaccatcactgacctgggcaacaccaagaaccagatcgtcacagagatt
aacaggttgcaggaggacctggacgatcacattgaggacagcaaggtgcgtttcgacaat
ttgggcgataatattaagcgctttggcagcaacctggttgtggaaatggaggactgtcga
cgctccaaggaaggactggacaagaggatcaccaaaatggaggacatgtgcggccgcctg
gacgtggtctcggacagcatacagaagatcaaggatgggctgaacaaacatgtctcgggg
ttgtgggagtgtgtcaatgggctcaacgccactgtgatctcccatggcgacaccatcgac
attcacagcgtagacctggagaacatccatgaccagatccatggcctcaactcctccata
ctccgtatccttgacgacgtccaggacttcacccatcaggactttgttggaccccctgga
cctccaggcctgcagggggagagagggtaccagggcctccctgggcagagaggtcttccg
ggacgtgagggacctcagggcaaacaaggcctaaaagggccgatgggaccaccaggcctg
aggggagaggaaggtccacctggacaggatgcacatgtgcccaggctgtctttctctgct
gccctcacgcgacctcagactacttctggcaccatcattttcgataagactctggtcaat
gagggacgagcatataacccaagaagtggtatgttcacagcacctgtgaagggcaggtac
ttcttcagcgccatcctgacgggtcacaagaatgtgaagatcgaggctgtgctctccaag
tccaactttggcatcgcccgtggcgactcggcgggctaccagcctgagggcctggagaag
ccaatggccgagacgcgcctcattcccgggtcgttggtggtcttcaacatcatcctgccc
ctggaggccggtgacaccgtctgcattgacctggtcaccggcaaactggcccactctgtg
gagcctctcactatcttcagtggagttctgctgtacgaggagaaagacatctga
DBGET
integrated database retrieval system
