Alosa sapidissima (American shad): 121712159 Help Entry 121712159         CDS       T11137                                  Symbol stxbp5a Name (RefSeq) syntaxin-binding protein 5a   KO K08518   syntaxin-binding protein 5 Organism asad  Alosa sapidissima (American shad) Brite KEGG Orthology (KO) [BR:asad00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:asad04131]     121712159 (stxbp5a) Membrane trafficking [BR:asad04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     121712159 (stxbp5a)  SNARE   VAMP, Ykt6, Sec22 (R)    Tomosyn     121712159 (stxbp5a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LLGL Beta-prop_THOC3 WDR55 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_WDR36-Utp21_1st WD40_WDHD1_1st Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_TEP1_2nd WD40 Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_RSE1_2nd EIF3I Beta-prop_WDR3_2nd Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_NUP159_NUP214 Synaptobrevin Beta-prop_Aladin Lgl_C Motif Other DBs NCBI-GeneID:  121712159 NCBI-ProteinID:  XP_041952180 LinkDB All DBs Position 6:complement(13645704..13751250) Genome browser AA seq 1146 aa AA seqDB search MKKFNIRKVLDGLTASATPSQPLGVRENDLVHETLQSEHFQLCKTVRHGFPYQPSAMALD PVQKLLAIGTQSGALRIFGRPGVECHCQHESGAAVIQLQFLINEGALVSALADDSIHLWN LRQKRPAVLHSLKFNKERITFCHLPFQSKWLYVGTERGNVHIVNVESFTLSGYTIMWNKA IELSSKAHPGPVVHISDNPMDEGKLILGFEAGIVVLWDLKSKKADYRYTYDEAIHSVSWH HEGKQFICSHSDGSLTIWNIKNPARPQQTITPHGKQPKDGKKPEPCKPILKVEYKTTRLG EPFIILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPYAVV VLLEKDLVVIDLAQNGYPIFENPYPLTLHESPVTCCAYCADCPVDLIPALYSVGLRQKRQ GYSKKEWPISGGNWGQGAQSYPEIVITGHADGSLKFWDASAIMLQVLYKLKTAKVFEKNR SKDDKPSTEIVDEDPFAIQLLAWCPESRVLCVAGVSAHIIIYRFSKQEVTTEVIQLLEVR MQCDLSDLDSPDVGGDQAQVAPTSSSSPSPQAAAPPTRPSTSSNNSDHTRDNVPCLKVRS SSLKQSPGYQVELVVQLVWVSGEPPQQISSLAINSAYGLVVFGNSTGVGVVDYLQKTVLL NLSTAELYTTNDPYQRQPRSPRKSRQPSGGLCDINEGSATSDDRCKSPTSVLSSNHQQFY NGAGKAKMSRKLSLPTELKPDLVLLSVCPSRAPVPLDHRDNSFSRSRSSSVTSIDKEARE GITELCFCETMARRAEGGGPQPALWVGTLLGTVLTATLSLPPAGEQRLLQPIIASPNGAL VRLKGSILRIAFLDAAGVFQLSPYEQWYEPNAAEEERTRRRRGGGLPSPCGGGGGGSGGG LDLERDSQFGVICSEKQAKVLSLPSQTCVSKHNITETSFVLRADVVVLNSGACVACFCAN GHIMTLSLPYLRPLLDVNYLPLTDMRIARTFCFSNLGQALYLNSPTEIQRLTYSQEVCEN LQEMLGEMFIPVETPEAPNRGFFKGLFGGGAQSLDREELFGETGAGKAPRSLAQHIPGPG GIEGMKGAASGIMGDLARTRMALDERGQKLSEVEEKTAAMMNSADSFSKHAHEMMLKCKD KKWYQF NT seq 3441 nt NT seq  +upstreamnt  +downstreamnt atgaagaagtttaacatccggaaggtgctggacggactaacggcttccgccacgccgtcg caaccgctgggcgtgagagaaaacgacctagtccacgagacgctccagtcggagcatttc cagctctgcaagactgtccgtcatggcttcccctaccagccctcggccatggccctggac cccgtccagaagctactggccatcggaactcagagtggagctttacggatatttggccga ccaggagttgagtgtcactgtcagcatgagagtggagcagccgtcattcaactgcagttc ctcattaatgagggggcattggtgagcgccctggccgatgacagcatccacctctggaat ctacgacagaagagaccagccgtacttcactcactaaagttcaacaaagagaggataacg ttctgccacctgcccttccagagcaaatggctgtatgtgggcacggagcgcgggaacgtc cacatcgtcaacgtggagtccttcaccctctcaggctacaccatcatgtggaacaaagcc atcgaactctcctccaaggctcaccctggcccagtggtgcacatcagtgataaccccatg gacgaggggaagctgatccttggatttgaggctggaatcgttgtgctgtgggacttaaaa tcaaagaaggcagattaccgttacacatacgatgaggctatccactctgtgtcctggcac catgaggggaagcagtttatctgcagtcactctgatggctcgctcaccatctggaacatc aagaaccccgccagaccccaacagacaatcactccacacggaaaacagcccaaggatggg aagaagccagagccatgtaaacccatcctcaaggtggagtacaaaaccactagacttgga gagccctttataatcctctcgggcgggctgtcgtatgacaccgttggcagacggccctgc ctgacggtgatgcatggcaagagcacggccgtgctggagatggactaccccatcgtggac ttcctcaccctctgcgagacaccctaccccaatgatttccaggagccatatgctgtggtc gtcctgctagagaaagacttggttgtaattgaccttgcacagaacgggtaccccatcttt gagaacccctaccccctgacgctgcacgaatctccggtcacatgttgtgcgtactgtgct gactgcccagtggacctcattcctgcactttactctgtgggcctacgccagaaacgccag ggctacagcaaaaaggagtggcctattagtggggggaactggggtcagggtgcacagagc tatcctgagatagtcatcacggggcatgccgatggctcattgaaattctgggatgcctct gcaataatgctgcaggttctgtacaagctgaagacggccaaggtgtttgagaagaaccgg agcaaggatgacaagccgagcaccgagatcgtggatgaggacccttttgccatccagctg ctggcctggtgcccagagagtagggtgttgtgtgtggcgggtgtgtccgcacacatcatt atataccgcttcagcaagcaggaggtcaccactgaggtcatacagttgttggaggtccgt atgcagtgtgatctgagcgatctggactctccagacgtgggcggtgaccaggcgcaggtg gcccccacttctagctcctcccctagccctcaggccgccgcccctccgacacgcccatca accagcagcaacaattcagaccacaccagagataacgtgccctgcctcaaggtgcgcagc tcgtctctgaagcagtcgccgggttatcaggtggagctggtcgtgcagctcgtgtgggta agtggggagccgccccagcagatcagcagcctcgccatcaactcagcctacggccttgtg gtgtttggcaacagtacaggtgtgggagtggtggactacctgcagaagacggttctgctc aacctgagtacagctgaactctacactaccaacgacccctatcagcgacagccacgctca ccacgcaagagcagacaaccctctggaggtctgtgtgacatcaatgagggctcggccaca tcagacgaccgctgcaaatctcccacctcagtgttgagctcaaatcatcagcagttctac aatggagcaggcaaagcaaagatgtccaggaagctaagcttgcccactgagcttaagcca gacttggtcctactctctgtatgtccctcgcgggcacccgtccccctagaccaccgggac aactccttcagccgctcgcggagctccagcgtgacgagcatcgacaaggaggcgcgcgag ggcatcacggagctctgcttctgcgagaccatggcccggcgggcggagggcggggggccg cagcccgcgctctgggtgggcaccttgctgggcaccgtgctcactgccaccctcagtctg ccccctgctggagagcagcggctactgcagcccatcatcgcctcgcccaacggtgctctg gtgcgtctgaagggcagcatcttgcgcattgccttcctggacgccgccggggtcttccag ctttccccgtacgagcagtggtacgagcccaatgcggctgaagaggagcgtaccaggcgc cggcgtgggggtggcctgccctcgccctgcggtggtggcggaggtggcagcggcggtgga ctggacctggagagggactcccaattcggggtgatctgctcggagaagcaggccaaggtg ctgtcgctgccgtcgcagacgtgcgtgtccaagcacaacatcacggagacgtcgttcgtg ctgcgcgccgacgtggtggtgctcaacagcggcgcctgcgtagcctgtttctgtgccaac ggacacatcatgacgctcagtctcccgtatctgcggccgctgctggatgtgaactacctg cccctaacggacatgcgcatcgcccggacgttctgcttctccaacctgggccaggcgctc tacctgaactcacccactgagatacaaagactcacctacagccaggaggtctgcgagaac ctgcaggagatgctgggggagatgttcattccagtggagacccccgaggcacccaatcgg ggattcttcaaggggctgtttggaggtggagcacagtcgttagacagggaggaactattc ggggagactggtgcaggtaaggccccgcgtagcctggctcagcacatcccgggccccggg ggcattgagggcatgaagggcgccgcctcgggcatcatgggggacctggcgcggacccgc atggcactggacgagcgaggacagaagctgagcgaggtggaggagaagacagccgccatg atgaacagtgccgactccttctccaaacacgcacatgagatgatgctgaaatgtaaagat aagaagtggtaccagttctga

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