KEGG   Alosa sapidissima (American shad): 121712231
Entry
121712231         CDS       T11137                                 
Symbol
calr3b
Name
(RefSeq) calreticulin 3b
  KO
K08057  calreticulin
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad04141  Protein processing in endoplasmic reticulum
asad04145  Phagosome
asad04148  Efferocytosis
asad05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:asad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    121712231 (calr3b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    121712231 (calr3b)
   04148 Efferocytosis
    121712231 (calr3b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    121712231 (calr3b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:asad03110]
    121712231 (calr3b)
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:asad04091]
    121712231 (calr3b)
Chaperones and folding catalysts [BR:asad03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   121712231 (calr3b)
Lectins [BR:asad04091]
 L-type lectins
  121712231 (calr3b)
SSDB
Motif
Pfam: Calreticulin DDHD
Other DBs
NCBI-GeneID: 121712231
NCBI-ProteinID: XP_041952257
LinkDB
Position
1:43413121..43417777
AA seq 418 aa
MKVAVVFCTIAVVALSVNATVFFQEEFLDGDAWKSRWVNSEHKSDYGQFKLTAGNFYGDA
EKDKGLQTSQDARFYAMSARFEPFSNEGKTLVIQFSVKHEQKIDCGGGYVKVFPSDLDQA
AMHGDSQYYIMFGPDICGYSTKKVHVIFNYKGKNHLIKKEVKCKDDELTHVYTLILNPDQ
TYEVKIDNEKVESGSLEEDWDFLPPKMIKDPEAKKPEDWDDSPKIDDAEDTKPEDWDKAE
NIPDPDAKKPEDWDEDMDGEWEPPMIPNPEYKGEWKPKQIDNPNYKGAWVHPEIANPEYT
QDAEIYKFDSIGVLGLDLWQVKSGTIFDNFLITDNVKEAEDFAKETWGVTKGPEKAMKEE
QEEKKRKEEEEKNKEQDTDGDEDGEEEEDAEEEDEDEDDTEEPDVTETDENKKEKDEL
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgaaggttgccgtcgttttctgcacgattgctgtagtagcattatcagtaaatgctacc
gtcttcttccaggaggagtttctggatggagatgcatggaagagtcgctgggtgaactct
gagcataagtctgactatggccagttcaaactcactgctggaaatttctatggcgacgca
gagaaggacaaaggccttcagaccagccaagatgcccgcttctatgcaatgtctgccagg
tttgagcctttcagtaatgagggcaaaaccctggtaatccagttctctgtgaagcatgag
cagaagattgactgtggtggtggttatgtgaaggtgttcccctctgaccttgatcaggct
gccatgcatggagattcccagtactacatcatgtttgggcctgatatctgtggctacagc
accaagaaggttcatgtcatcttcaactacaagggaaagaatcatctcatcaagaaggaa
gtcaagtgcaaggatgatgaacttacacacgtgtacacgttgatcctcaacccagaccag
acctatgaggtgaagatcgataacgagaaggtagagtcgggatctctggaggaggactgg
gatttcctcccccctaagatgatcaaggacccagaggccaagaaaccagaagactgggat
gatagccccaagatcgatgatgctgaggacaccaagcctgaggactgggacaaggctgag
aacatcccagatcccgatgccaagaagccagaggactgggatgaagacatggacggcgag
tgggagcccccaatgatccccaaccctgaatacaagggagaatggaaacccaaacagatc
gacaatcccaactacaagggggcgtgggtccaccctgaaatcgccaatcctgaatacact
caggatgccgagatttacaagtttgacagcatcggtgtcctaggcctggacctgtggcag
gttaagtccggcaccatttttgacaacttccttatcacagacaatgtgaaggaggctgaa
gattttgcaaaagagacatggggagtcacaaagggcccagaaaaggcaatgaaggaggag
caggaggagaagaagaggaaagaggaggaggagaagaacaaggagcaggacacagatgga
gatgaagacggcgaggaagaggaagatgccgaagaggaagatgaagatgaggacgacacc
gaggagcctgatgtcacggaaacggacgagaataagaaggagaaggacgagctctga

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