Alosa sapidissima (American shad): 121712355
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Entry
121712355 CDS
T11137
Symbol
gpcpd1
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
121712355 (gpcpd1)
Enzymes [BR:
asad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
121712355 (gpcpd1)
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Motif
Pfam:
GDPD
C2_GDE1
CBM_20
TreTu_C
Motif
Other DBs
NCBI-GeneID:
121712355
NCBI-ProteinID:
XP_041952523
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All DBs
Position
6:17579150..17604297
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AA seq
675 aa
AA seq
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MESTEVILTVRGTTSPDEVIAAVGSCESLGNWCYQKAVTLEPTEEDGTLWKKTITVPRGG
VTSYRYFKGFFLENKSAGGPCQVIVNRWETHLHPRALNPTDANLEVDDGQFGFHNGTENV
DSGWLTCQTEIRLRLHYSLKPAVSITKKKFKKSRFRLKLTLEGVEEEEDDEEEQPSPSSA
TSWHKMATTLEFGLITAGSYKSRHSQPECGYALDPTQWIEYSIQTMDPDNLELTFEFFEE
DMSEKVVQEDNHPGLVGTACLLSSFFAESGKDTGLITLPIIYRNSRQTIGKVRVDYLVIR
PIKDLQCDMQASFSKYWRKRSTLDVGHRGAGSSHTAKHHRVRENTIGSFLSAANHGAAYV
EFDVHLSKDFVPIVYHDLTCCISTKKKKDDKNNLMLFEVPVKDLTFNQLQLLKLAHSAAM
TVNDHKDDEEEEIDEHQPFPSLSQIFQSVPEHVGFNIELKWICQNQDGSWDGNLSTYFNM
NLFMDIILSCVLQNAGKRRILFSSFCPDICTMVRQKQNKYPILFLTQGVTSMYPELMDIR
CKTTQIAMSFAQSENILGISAHTEDLLKSMEFISQAQSRGLVVFCWGEDNNDHENRHKLR
EQGIDGVIYDRICDDQMEQPNIFQVEEQVSLQEVIPKETLQSCACSTYSLPCDSVPCPTR
AQTGSGESDSGLSSS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaacagaggttatattgactgtaagaggaaccacctctcccgacgaagttata
gcagctgtgggcagctgtgagtctctgggaaattggtgttatcagaaagctgtgacctta
gagcctacagaggaggacgggacgctctggaaaaagacgattactgttccacgaggaggt
gttaccagttaccgctacttcaaaggattctttctcgaaaataagagtgcaggtggccca
tgtcaagtcatagtcaatagatgggagacccatctacaccctcgagcattgaaccccaca
gatgccaaccttgaggtggatgatgggcagtttggattccacaacggcactgagaatgtg
gactctggctggctcacctgtcaaacggagattcgcctgcggttgcactactctctcaaa
ccagccgtgtccataaccaagaagaagttcaagaagtcccgcttcaggctcaagctgaca
ttggagggcgtggaggaagaggaagacgatgaggaagagcagccgagcccatcatcggcg
acctcatggcacaagatggcgacaacgctagagttcggccttatcacagcgggcagctac
aagtcacgccactcccagcccgagtgtggctacgccctggatcccacacagtggatcgag
tacagtatccagaccatggaccctgacaacctggagctcaccttcgagttctttgaggag
gatatgagtgagaaggtggttcaggaagacaaccaccctgggctcgtgggcacggcctgc
ctcctgtcctccttcttcgcagagagtggcaaagacactggcctcatcaccctgcccatc
atataccgaaactctaggcagaccattggcaaagtccgagtggactacctggtgatccgg
cccatcaaggatctgcagtgtgacatgcaggcgtccttcagcaagtactggaggaagagg
agcacgctggacgtgggacacaggggagccggtagctcgcacactgccaagcatcacagg
gtcagggagaacaccattggctcatttctgagtgcagccaatcatggggctgcctatgtg
gagttcgatgtccatctgtctaaggactttgtcccaatcgtctaccatgacctgacctgc
tgcatctccaccaaaaagaaaaaagacgacaagaacaacttgatgctgtttgaggtgcct
gtgaaagacctgacatttaaccagctgcagctcctaaagctggcccactctgccgccatg
actgtcaacgaccacaaagatgatgaggaggaggagatcgatgagcatcagccgttccct
tcgctctcacagatcttccagtcggttccagaacacgtggggttcaacattgagctgaag
tggatctgccagaatcaggatggcagctgggatgggaacctttccacctacttcaacatg
aatctcttcatggacatcattctgtcctgtgtgctgcagaatgctggcaagagaaggatc
ctcttctcctccttctgcccagacatatgcaccatggtacgtcagaagcagaacaagtac
cccatcctgttcctgacccagggggtgaccagcatgtaccccgaactcatggacatccgc
tgcaaaaccactcagattgccatgagcttcgcccagagcgagaacatactgggtatcagt
gcgcacactgaggacttgttgaagagtatggagttcatatctcaggcccagtcgaggggg
ctcgtggtgttctgctggggcgaagacaacaacgaccacgagaacagacataagctgagg
gagcagggcattgacggagtaatttatgacagaatctgcgacgaccagatggagcagccc
aacatcttccaggtagaggagcaggtgtctctgcaggaggtgatccccaaagagacgctg
cagagctgcgcctgctccacctacagcctgccctgtgacagcgtgccctgccccacgagg
gcccagactggcagcggagagtctgactctggcctcagctcctcctga
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