Alosa sapidissima (American shad): 121712484
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Entry
121712484 CDS
T11137
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121712484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asad04121
]
121712484
Enzymes [BR:
asad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121712484
Ubiquitin system [BR:
asad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121712484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_2
zf_RING_Vps8_fungal
zf-RING_UBOX
zf-rbx1
PHD_NSD
zf_RING_Vps8
zf-ANAPC11
zf-UDP
PHD
Motif
Other DBs
NCBI-GeneID:
121712484
NCBI-ProteinID:
XP_041952578
LinkDB
All DBs
Position
1:42989619..43013303
Genome browser
AA seq
759 aa
AA seq
DB search
MDTMLLASAVVVWEWLNEHGRWRPYSPAVSHHIEAVIRSDPRGGSVVLGQVDNRLSPYII
DLQSMHQFRQDTGTLRPVRRSFYDPTSAPGQGWLWEWENDTGSWTTYDMEVGIAIQAARD
RNQPWLDLAPLGFCYLIDFQSMTQINRQTQRCRRIQRRSDMAYPLVSGPLPKSAQGGWAT
SGTGGGSGAGGPSAGGSTGMLLGVGVSGVTLSSGGHNGGSSSNGSVVYPSSTVSMSSLAS
LGQPCACQQCMLVMSVKANAMAASHTLGRKPSQSKPSLSPKGTAAGTSGSAGTNSNSYSH
TLPHALSYASSARTLSPRRSAAAFAHSISLLASGTATLSVSNRPPPPPLPPPQPPTPANQ
QQLQGTSSTPGPPPSSSPSTTSTPSVPTATLITTATTTTSSSSPLPLPSPAVPAQRSAAC
AAPLPPRASLAGLSRPALQRIAMAQSRALIASGVPTVPVKNLSGASPVHPALAGITGILM
SAAALPVCLTRPPRLVLHPPPVSKSDIKPIPGLGHCCRKTTKKQARKGKTPEEVVKRYLQ
KVRNTPEEDCTICMEALGGPSGYKGPGVGGISRGESVGRLAQCGHQYHVQCLVAMYNNGN
KDGSLQCPTCKTIYGVKTGNQPPGKMEYHVIPHSLPGHPDCKTIRIIYNIPPGIQGPEHP
NPGKPFTARGFPRHCYLPDSEKGRKVLRLLLVAWDRRLIFSVGTSSTTGESDTVIWNEVH
HKTEFGSNLTGHGYPDPGYLDNVLEELKAQGITEDEIQQ
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggacacgatgttactggcctctgccgtggtcgtctgggaatggctcaacgaacacgga
cggtggcgtccctacagcccagccgtgtctcaccatatcgaggcggtgatacgaagcgat
cctcggggcggcagcgttgtgctaggccaagtcgacaaccgcctctcgccgtatattata
gatctgcaatccatgcatcagttccgacaagatacgggcacattgagaccagtacgacgc
agcttctatgaccccacgtcagcgccgggccagggttggttgtgggagtgggagaatgac
accggctcctggacgacgtatgacatggaagtcggcatcgccatccaggcggcgcgggac
cgtaaccaaccctggctggacctggcgccgctggggttttgctacctcatcgatttccag
agcatgacgcagatcaaccggcagacgcaacggtgcagacgcatccagcggcgctcggac
atggcctaccctctcgtgtctggcccgctccccaaatcggcccaaggaggctgggccacc
tcaggcacagggggggggagtggagcaggaggacctagtgctgggggctcaacggggatg
ctcttaggtgttggggtgtctggtgtcaccctgtccagtgggggacacaatggaggtagc
agcagtaatgggagtgttgtgtatcccagcagtacggtctccatgtcctccctagcctct
ctaggtcagccttgtgcctgtcagcagtgtatgcttgtcatgagtgtcaaagccaatgct
atggcggcatcgcacactttgggccgcaagccctcgcagtccaagccgtccctgagccct
aaaggtacagccgcaggtacttctggttccgccggtacaaactcgaactcgtactcgcac
actcttccacacgcactctcgtacgcctcctcagcgaggactctctccccgcgcagaagc
gcggccgcgttcgcccactccatttccctgctcgcctccggcactgccacgctgtctgtc
tccaaccgaccacctccgccacctctgcccccaccccagccacccaccccagccaatcag
cagcagctccaaggcacgtcttccacacctggcccccctccttcttcctccccctccacc
acttcgacgccatcggtgcccactgccacgctcatcactacggcgaccaccaccacctct
tcgtcctcacctcttcctttgccttcacctgccgtgcccgcgcagcgctccgccgcctgt
gccgccccactgccgccccgtgccagcttggcaggcctcagccgtcctgccctgcaacgc
attgccatggcacagtcgcgggcacttattgcctcaggggtgcccacggtgccggtgaag
aacctgagcggtgccagcccggtgcacccggcactggcgggcatcacggggatcctgatg
agcgccgccgctctgcctgtgtgcctcacgcgcccgcccaggctggtgctgcacccgccg
cccgtcagtaagagcgacatcaagcccatccctggcctcggccactgctgccgcaagacc
accaagaagcaggctcgcaagggcaaaaccccagaggaagtggtgaagcgctacctgcag
aaggtccggaacacccctgaggaggactgcaccatctgtatggaggctctcgggggtccg
tccggctacaaaggccccggagtcggggggatctctcggggggagtcagtgggccgtctg
gcccagtgtggccaccagtaccacgtccagtgcctggtggccatgtacaacaatggcaat
aaagatggcagcctccagtgtccaacgtgtaagaccatttacggggtgaagacgggaaac
cagccgcctggcaagatggagtaccacgtcatcccgcactccctgccagggcaccccgac
tgcaagaccatccgcatcatctacaacatccccccaggcatccagggacctgagcaccca
aacccaggcaaacctttcaccgcaagaggcttccctcgtcactgctatctccctgacagc
gagaaggggcgcaaggtgctgcggctgctactggtggcatgggaccggcgtttgatcttc
tccgtgggcacgtccagcaccactggcgagtccgataccgtcatctggaatgaggtccac
cacaagaccgagtttggctccaacctcacaggccacgggtaccctgaccctggctacctg
gacaatgttttggaagagctgaaagcccagggcatcacagaggacgagatccagcagtga
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