Alosa sapidissima (American shad): 121712795
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Entry
121712795 CDS
T11137
Symbol
top1
Name
(RefSeq) DNA topoisomerase 1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asad03032
]
121712795 (top1)
Enzymes [BR:
asad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
121712795 (top1)
DNA replication proteins [BR:
asad03032
]
Eukaryotic type
DNA Topoisomerases
121712795 (top1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
121712795
NCBI-ProteinID:
XP_041952736
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All DBs
Position
7:11030087..11055427
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AA seq
769 aa
AA seq
DB search
MSGDHGYKDYQMDSGARINDSQRHKDKHRDKEHKHKDHKKDKEREKSKHSNSDHREPSEK
KHKDREREKEKERVKHKDDSLERHKDKEKRREEKMKSHSADGKHKREKENGFASPPRIKS
ENDDNGYYHSPKHEKSVKRQFEEDEVEYKPKKVKVENEKKAKKRKHEDYYEDEEEEEDVK
PKKKTKDKKQETAGGKKKLKKEPEQKWKWWEEERATDGSKWRFLEHKGPVFAPPYEPLPG
HVRFYYDGKPFKLSTSAEEVATFFAKMLDHEYTTKDAFRKNFFKDWRKEMISEEKGKLTD
LNKCDFSELSEYFKAQSEARKQMTKEEKLKIKEENERILEEYGFCVMDNHRERIGNFRIE
PPGLFRGRGNHPKMGMLKRRIRPQDVIINCSKDSKHPKPPSGTKWKEVRHDNKVTWLASW
TENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKSCVDRIRNQYREDWKSKEMRIRQRA
VALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHIKLYPEMDGQEYVVEFDFLGKDSIR
YYNKMPVEKRVFKNLQLFLENKQPEDDLFDRLNTSILNKHLQELMEGLTAKVFRTYNASI
TLQQQLKELTCSDDNLPAKILSYNRANRAVAILCNHQRAPPKTFEKTMQNLQTKIDEKKK
QLSSAKKELKSAKADAKTLHDDKSRKAVETKKKAVQRIEEQLMKLEVQATDREENKQIAL
GTSKLNYLDPRISIAWCKKYEIPVEKIYNKTQREKFAWAIDMADEDFEF
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtgatcatggttacaaagactaccagatggactctggtgctcgtatcaatgac
tctcagagacacaaggacaaacacagagacaaggagcacaaacacaaggaccacaagaaa
gacaaggagagggagaaatccaagcacagcaacagcgatcacagagagccttctgagaag
aagcacaaagaccgcgagcgagagaaagagaaagagagggtgaaacataaagatgacagc
ctggagaggcacaaggacaaagagaagagacgcgaggaaaagatgaagtcccatagtgca
gatggcaaacacaagagggagaaggagaatggttttgcgagccctcctcgcattaaaagt
gaaaatgatgacaatggctactaccactcccccaagcatgagaagtcagtgaaaaggcag
tttgaggaagacgaggtagaatataaacctaagaaagtcaaggtggagaatgaaaagaag
gcgaaaaagaggaaacacgaggattattatgaagacgaggaagaagaagaggatgttaaa
cccaagaagaagacgaaagacaagaaacaggagacagctggcggcaaaaagaagctgaag
aaagagccggagcagaagtggaaatggtgggaagaggagagagccacagatggatccaaa
tggaggtttctagaacataaagggcctgtgttcgcgcctccctatgagcctcttcctggg
catgtcagattttattacgatgggaagccattcaagttgagcacctctgccgaggaggtg
gccacattctttgccaaaatgcttgatcacgagtacaccactaaagacgctttcagaaag
aactttttcaaagattggagaaaggaaatgatatcagaggagaagggaaagctaacagac
ctgaacaagtgtgacttcagtgagttgagtgagtacttcaaggctcagtcagaagccagg
aaacagatgacaaaagaggagaaactgaaaatcaaagaagagaacgaacgaatcctggag
gagtacggcttctgcgtgatggataaccaccgcgagcgcatcggcaacttccgcatcgag
cccccgggactgttccgcggccgtggcaaccatcccaaaatggggatgctgaagcgccgc
attcgtccacaggatgtcatcatcaactgcagcaaggattccaaacaccccaagcccccg
tctggcaccaagtggaaggaagttcgtcatgacaacaaggtgacgtggctggcttcttgg
acggagaacatccagggctccatcaaatacatcatgctcaaccccagctccaggatcaag
ggtgagaaagactggcagaagtatgagacggctcggcggctgaagagctgcgtggaccgt
atccggaaccagtaccgcgaggactggaagtccaaggagatgaggatcagacagcgagcc
gtggctctatacttcattgacaagctggccctgagagcgggcaatgagaaggaggagggc
gagacggcggacacggtgggctgctgctcgctgcgcgtggagcacatcaagctctacccc
gagatggacggccaggagtacgtggtggagtttgatttcctggggaaggactccatccgc
tactacaacaagatgcctgtggagaagagggtatttaagaatcttcagctattcctggaa
aacaagcagcctgaagatgacctcttcgacaggctcaatacgtccatcctgaacaagcac
ctccaggagttgatggaagggctgactgccaaagtgttccgtacctacaacgcctccatc
acgctccaacagcagctgaaggagctcacctgctctgatgacaatcttccagccaagatc
ctctcctacaaccgagccaacagagctgttgctatactgtgcaaccaccagagggctcca
ccgaagacctttgagaaaaccatgcaaaacctccagaccaaaattgatgaaaagaagaaa
cagctctcatctgccaagaaggagctaaagtcggctaaagcagatgctaagactctccac
gatgacaaaagcagaaaagctgtggagaccaagaagaaggcggtgcagaggatagaggag
cagctgatgaagctggaggtgcaggccactgaccgcgaggagaacaagcagatcgcccta
ggcacatccaagctcaactacttggatccgcgcatctccattgcctggtgtaaaaagtac
gagatccctgtggagaaaatctacaacaaaacccagcgcgagaagtttgcctgggccatt
gacatggcagatgaagactttgagttttaa
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