Alosa sapidissima (American shad): 121712802
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Entry
121712802 CDS
T11137
Name
(RefSeq) putative helicase mov-10-B.1 isoform X1
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asad03019
]
121712802
03036 Chromosome and associated proteins [BR:
asad03036
]
121712802
Enzymes [BR:
asad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
121712802
Messenger RNA biogenesis [BR:
asad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121712802
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
121712802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
MOV-10_Ig-like
MOV-10_beta-barrel
AAA_11
Mov-10_helical
MOV-10_N
AAA_30
AAA_19
ResIII
AAA_22
Cep192_D4
SNF2-rel_dom
AAA_16
UvrD-helicase
HYDIN_VesB_CFA65-like_Ig
AAA_7
AAA
DUF5580_M
DUF2461
Motif
Other DBs
NCBI-GeneID:
121712802
NCBI-ProteinID:
XP_041952747
LinkDB
All DBs
Position
7:3884355..3924169
Genome browser
AA seq
1003 aa
AA seq
DB search
MPRRTLYENRQIGLDFIEFLGESNRRSVKFTKQELKDIYNNEFRDRDAKDSNFSNVLFAL
CHANKARIIRGRVHIDPRVRLLDQWRQPRNPPAPPPPLANGAAAPAGVSEPESAVKARRQ
LAASIYSRINRDRSEFIADRGGVRISSGHQQGEGRICVSVQSAAECEVQLCVENTGDGAV
LFTYYSLLHWVACFSLEDEQKVTRARPLHLPPGEQYGVTLRFRARHVGFYQATLVFEFRS
ASAAADSPPFHVLRFIEGMHTSALTEALAPIAPYTPRRINASQHPNARVEDGVRPDSFVV
QNLKQVLILESYDIPLYIVDLISYMTQSRRATMDKVYTLKALLESPLSFENYTERFQVLL
QLEETQMQVDIRTYDMQDAKMDRDPNNKNNKLLVLKVPGVAENRPSVLRGDHLLVIKSKE
RHLVPVTQHKGYVHRVEWDQVKLGFGSKLLRDFVDGMGFDVEFTVNRLPIRLQHRAVELA
TEHHLRDLLFPTGAKVATPAELPNLRLRDRKLESNSEQYSAVQSIVAGVSRPAPYLLFGP
PGTGKTVTVVEAIKQLYDSPSCSHILACAPSNSAADLLCEKILEHADQHQVYRLYASSRD
PRFIPLAVLECCNFHGDDIVFPSKEVLLEYKILVTTVVTAGRLVSGGLHKGHFSHIFIDE
AGHAPEPEVMIPVAGLLDPKSGQLVLAGDPKQLGPILRSPIAKKHGLELSLLERLMKHNP
LYQKDETGHYNSRYVTKLLLNYRSHKSILKIPNDLFYDGELVASADEMSTHMYCTWEHLP
KQNFPLIFHGVIGKDEMEANSPSFFNRSEIDVVMGYLKKLLLEAQGKKGVARISPKDIGI
IAPYRKQVEKIRQAIERHDKELKKIMGIENLKVGSVEEFQGQERRVIIVSCVRSSGEHLT
FDEKFNIGFLKNEKRFNVAMTRAKALLIVVGNPIILRTDPSWGRFLEYCSSESGYTGYDF
SSTEGVEQVMARLTALNIGQDTPVDTGESVVQQMLDPEWRNEQ
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgacgaacactgtatgaaaaccgtcagataggacttgactttattgagttcctg
ggcgaaagtaataggcggtctgttaaattcactaaacaagaactcaaagatatctacaac
aacgagttccgggacagggatgccaaggactcaaatttttcaaatgtcttgtttgcactt
tgccatgcgaataaagcgcgtattatccgtgggcgtgtgcacatcgatcctagggtgaga
ctgctggaccagtggagacagccccgcaatcctcccgcccccccgccaccattagccaat
ggcgcggcagcgccagcgggggtgtctgagccagagtctgccgtcaaggcccggagacaa
ctggccgcgagtatctactccagaatcaacagggacaggtcggagttcatcgctgaccgg
gggggcgtgcggatctcctccggccatcagcagggtgaggggcggatctgtgtgagtgtg
cagagcgcggcggagtgtgaggtccagctgtgtgtggagaacacgggcgacggagccgtc
ctcttcacctactactccctactgcactgggtggcctgcttcagcctggaggacgagcag
aaggtcacccgcgcccgacctctgcacctgccgccaggagagcagtatggcgtgactctg
cggttccgggctaggcacgtggggttctaccaggccacgttggtgtttgagttccggtcg
gcatcggcggcggcggacagcccgcccttccacgtgctgcgattcatcgaggggatgcac
acctccgccctgaccgaggccctggcgcccatcgccccctacacgccacgcaggatcaac
gccagccagcaccccaacgccagggtggaggacggagtgcgcccagacagttttgtggtc
cagaacctgaaacaagtgctgattttggagagctatgacattcccctctacatcgttgac
ctgatctcctacatgactcagagcagaagggccaccatggacaaggtctacaccctgaaa
gcgctgctggagtctcctttgagctttgagaactacacggaacgcttccaggtgcttctg
cagctggaggagactcagatgcaggtggacatccggacgtacgacatgcaggacgctaag
atggacagagaccccaacaacaagaacaacaaactgctggtgctcaaggtgcctggtgtt
gcagagaaccgaccctctgtcctcaggggtgaccacctcctggtcatcaagtccaaagag
cgccacctagtgcccgtaacccaacacaagggctatgtgcaccgtgtggagtgggatcag
gtcaagctgggattcgggtcaaagctgctgagggactttgtggacggcatgggctttgat
gtggagttcactgtgaaccggctgcccatcaggctccagcacagagcagtggagctggct
acggaacaccacctacgtgacctgctcttccccacgggggcaaaggtcgcgacccctgca
gagctgcccaatctgaggctgcgtgaccgtaagctggagagcaacagtgagcagtacagt
gctgtgcagagcatagtggccggagtgtccagaccagctccttacctgctgttcggacca
cctgggaccggcaagaccgtcaccgtcgtggaggccatcaaacagctgtatgattctccc
tcctgctcccacatcctggcatgtgctccgtctaacagcgctgctgatctgctgtgtgag
aagattctggaacacgctgaccaacaccaggtctaccgcctctacgccagcagcagggac
cctcgcttcatacctctggctgtcctggaatgctgtaactttcacggtgatgacattgtg
tttccctccaaagaggtgttattggagtacaagatcctggtgaccactgtggtgacagct
ggacggcttgtaagtggcggtctacataagggccactttagtcacatatttatagatgag
gctggtcatgcccctgagccagaggtcatgatccctgtggcagggttactggaccctaag
tcgggtcagctggttctggctggagaccctaaacagctgggccccatcctcagatcaccc
atcgccaagaaacacggcctggagctgtctctgctggagaggttgatgaaacacaaccct
ctgtaccagaaggatgagacaggccactacaacagccgctacgtcaccaaactactgctc
aactacaggtcccataagagcatcctgaagatccctaacgatctgttctatgacggagag
ctggtggccagtgctgacgagatgtccacccacatgtactgcacctgggaacacctgccc
aagcagaatttcccactgatcttccatggagtaatagggaaggatgagatggaggccaac
agcccgtccttcttcaaccgctccgagatcgacgtcgtcatgggatacctgaagaagctg
ctgctggaggcccagggcaagaagggcgtggcccgcatctcccccaaagacatcggcatc
atcgccccctacaggaaacaggtggaaaagataagacaggccatcgagagacacgacaaa
gagctgaagaagattatgggcatcgagaacctgaaggtgggctcagtagaagagtttcag
ggacaggagagaagagtgattattgtatcgtgtgtacgtagcagtggagaacacctgacc
ttcgacgagaagttcaacatcggcttcctcaagaatgagaagaggtttaacgtggccatg
acacgagccaaagccctgctcatcgtggtaggaaaccccattatcctcagaacagaccct
agctggggcaggttcctagagtactgctcgagtgagtcgggctacacaggatatgacttc
agcagcacagaaggagtagagcaggtgatggctcgtctgactgcgcttaacatcggccag
gatacgccagtggacacaggcgagagtgtcgtgcagcagatgttggatcccgagtggaga
aatgagcagtag
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