Alosa sapidissima (American shad): 121712830
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Entry
121712830 CDS
T11137
Name
(RefSeq) homeobox protein Hox-C5a-like
KO
K09305
homeobox protein HoxA/B/C5
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121712830
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121712830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121712830
NCBI-ProteinID:
XP_041952811
LinkDB
All DBs
Position
7
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AA seq
206 aa
AA seq
DB search
MSSYVANSFYKQPHDSYSMHTFGNYGSLSELQQSSYCHGGLDLSGNIADQASCNSPKREE
MSASLCVRTSTPPEPLSLKHRVEGAMEVTAKPSGKNRGNEIRDENVGNQQNCSIQNLNSK
QPQIYPWMTKLHMSHESEGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRVEIANSLCLNE
RQIKIWFQNRRMKWKKDAKLKVKESL
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttatgttgcgaactcattttataagcaaccgcatgactcttacagcatgcac
acctttggcaactatggttcactctccgagctccagcagagcagttattgccacggaggt
ctggatctcagcggaaacatcgctgatcaggcttcctgtaactccccgaaacgggaggag
atgagtgcaagcctctgcgtccggaccagcacgccacccgagcccctttcgctgaagcat
agggttgaaggagctatggaagtgaccgcgaagcccagcggcaaaaaccgagggaacgag
atcagagacgaaaatgtaggaaatcaacaaaattgttcgatccagaatttgaattcgaag
cagccacagatatatccctggatgaccaagctacacatgagtcacgaatccgagggtaaa
cggtcacgaaccagttacacccgctaccagactctggagttggagaaagaattccatttc
aaccggtacctcactcggcgcaggcgtgtcgagatcgccaatagcctgtgcctgaacgag
aggcaaataaaaatttggttccaaaacagacgcatgaagtggaagaaggatgcaaaactg
aaagtgaaggaatcgctatga
DBGET
integrated database retrieval system
