Alosa sapidissima (American shad): 121712873
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Entry
121712873 CDS
T11137
Symbol
prdm2a
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad00310
Lysine degradation
asad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121712873 (prdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121712873 (prdm2a)
03036 Chromosome and associated proteins [BR:
asad03036
]
121712873 (prdm2a)
Enzymes [BR:
asad01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
121712873 (prdm2a)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
121712873 (prdm2a)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121712873 (prdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-C2HE
zf-C2H2_6
zf-C2H2_ZNF462_1st
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
121712873
NCBI-ProteinID:
XP_041952877
LinkDB
All DBs
Position
7:complement(35855950..35866033)
Genome browser
AA seq
1604 aa
AA seq
DB search
MWNSEEVVVVKAEQLALASAGQSLQQVAVLQEGAVGESQAYVLQQGSVLPQTPFLCISVL
EKEPQEHEEEEEEEVDRHTTEDTPASSGEAVSIEAGGEADQSAAGGVETETETGVLEGSG
SAAEEPEEQAEDDPDYDPACDPQGHRAFQCHHCQRRFSTRQGLERHTHIHASTAAAVNTH
TLKCRFCTKTFGTQFGRRRHERRHESERKRLGRTGSSSAPTRPTSAPTCPVNAPATSESA
TSAPHLKIAPAVKILAAVRKTALGDAATRVRGSEEGGEQRGAHVCRHCRKVFGTHTNLRR
HQRRVHERHVLLSRLTSARAPPVVGQKTAPNQEALSSSPPAASPAPGGSGGGEEEVEREE
YMVDISSNISENLSFYIDGKIVSTSAISSCEVVEVNSGSAAVIGLDTLIINPAQIAQALK
MQSAVSGSRDIPGGQSASRRRTATPPLLPQIKTELESEPILTTTSSSSTPASFLPPASAV
GTVVGTLVGTVLSQSADPGGTQKEKTVYLSPKLKQLLQTQDGCQPTFALISDGHRLAPPL
SLTVLPSTSGRFKRRTGSPPSNGSPPITISSQQSPAGATENGGVTECPQEQAPVAQCSSP
PLSLTCKGDLEQSDPGGTASTVAPVPVHQNPPLDWSEPRTGGSPCNQQPLDLSSAAVSRR
EGSEELGEAALDLSMPGRGTEEGEGSGVVSSGPLQLRKTKPSSSMLQQVLMSDYASVPAP
VGDQGTNVAALVTDVAIVTAASVVPADPERLVAELALPPESSLLPSAPSLAPIPVLATQP
SSPSSAPGNPTPPVLPSASSSVVMVTSTPAQLLPVSSTTQPVLALLPTEASTSGAETGTD
KAPQGNEAQVKTVLPNWRGAVPICLSSAESLQNQTSAGGPPVGEMSLAGPTTDLLSPIPT
LQAFAASVNEPAIQSYSIIPNAVVIECTVSLESSQTFVPTFPGSTIESPYGKIILGPSEH
LQPYTTPQLQAPKPTAPLAAPAPNTDPPSQSDPSSSTAPPQQETAPSAPSSIKDESKSSD
GEPVESTTLPPAAPEASSQAEEKAVKEEPVLVNPLGNNFVCNVCSKPFPSMKELGRHIGE
HSEAWPYKCEFCVQLFESAKLFLDHRSTYHGIGKIYVCSVCSKDFAFLCNLQQHQKDLHP
GQTCSHTEVEDGRLRPQNYNSPNKDSTAAGPDATSDSSLQENERVTRKKAAKKEEEKEEK
EEEFDTATEELYTTIKIMASGMIRSKGPDVRLGINQHYPSFKPPPFPYHNRTPTGSVASA
TNFTTHNIPQTFSTAIRCTKCGQSFDNMPELHKHILACANASDKRRYTPKKNPIPLKQFA
RAQNGVLSPTTAANIRQNISRKAGQGGKRQNVSQDSLAKLKLSALNKRKAQLVQKAVSQR
NKSAALPKRSSGTGEEEQGSHVCPHCRREFTYRASLSKHIALSCPNKPVSKKARKRKEGV
GMSLVQENNANVRRRSPDTVGKQQGALQPQRAKPVVSGAGDHAGLPHLNKGDMKRSAILI
AAPAHPIKRSKNGPSSVLSPIPQSNSPHRLGRPLQNGEEPRIQTQNLQTQAAQQSIPIRV
RERKGGPVTRSLQQARSMVPPSGQVEAGTAPQPEGPQVALAGRK
NT seq
4815 nt
NT seq
+upstream
nt +downstream
nt
atgtggaactctgaggaggtggtggtggtgaaggcggaacagctagccttagcgtcggca
ggccagtctctgcagcaggtggctgtactgcaggagggcgcagtgggggagagccaggcc
tacgttctgcaacagggttccgtgctgccccagacccccttcctctgcatctccgtactg
gagaaggagccccaggagcacgaggaggaggaggaggaggaggtggacagacacaccacg
gaggacacgccagcgtcatcaggggaagctgtgtccattgaggcgggcggagaggctgac
cagagcgcagctggcggagtggagacggagacggagacaggagtgttagaaggttccgga
agcgcggcggaggagccagaggagcaggcggaggatgaccccgactacgacccggcgtgt
gacccgcaggggcatcgcgcgttccagtgccatcactgccagcgacgcttctccacgcga
cagggcctggagcggcacacacacatccacgcctccactgctgccgccgtcaacacacac
accctcaagtgcagattctgcaccaagaccttcggcacgcagttcggccggcgccggcat
gagaggaggcacgagagcgagaggaagaggctggggcggaccggttcctcttcagcaccg
acccgtcctacctcagcaccgacctgcccggtgaacgcccctgcaacatcggaatcagct
acgtccgccccgcacctgaaaatagccccggcggtgaagattcttgcggcggtgcgtaag
acggctctgggggacgcggctacgcgcgttcgtggatcggaggagggtggggagcagagg
ggcgctcacgtctgcagacactgccgcaaggtgttcgggacgcacaccaacctgcggcga
catcagcgcagggtgcatgagcgccacgtgctgctcagccgcctcaccagcgcaagggca
cccccggtggtggggcagaaaactgcacccaaccaggaggctctcagctcctctccccca
gcggcgagtccagccccggggggaagtgggggcggggaggaggaggtggagcgcgaggag
tacatggtcgacatctccagcaacatttcagagaacctcagcttctacatcgacggcaag
atcgtctccaccagcgccatcagcagctgcgaggtcgtagaggtcaactcaggctccgca
gctgtgattggtctagacaccctcatcatcaaccccgcccagatcgctcaggcactcaaa
atgcagtcagccgtatccggatcacgtgacatccccggcggccaatcagcatctaggcgt
cggacggccacgccaccgctgctgccgcagatcaaaacggagctggaatcggagcccatc
ctcaccaccacctcctcctcctccaccccagcctccttcctcccgcctgcgtcggcggtg
ggcacagtggtgggcacattggtgggcacggtcctgtcccagtcagcggaccccggtggc
actcagaaggagaagacagtctacctgtcgccgaagctgaagcagctcctgcagacgcag
gacgggtgccaacccaccttcgccctcatcagcgatggccaccggcttgccccccctctc
tccctcaccgtcctaccctctacctctggccgcttcaagaggcgcacagggtcccccccc
agcaatgggtcgccccccatcaccatctcctcgcagcagagccctgctggggcaactgag
aatggaggggtaacagaatgcccccaggagcaggcacctgtggcccagtgtagttctcca
ccacttagtctcacctgcaaaggcgatctggagcagtcagatcctggaggaacagcgtca
accgtggccccggtccccgtccatcagaacccacctctggactggtccgagcccaggacg
ggcgggagcccgtgtaaccagcagcctctggacctgtccagcgctgccgtgagccgcagg
gagggcagcgaggagctgggcgaggctgccctggatctgagcatgcccggtcggggcaca
gaggagggtgagggcagtggcgtggtgtcgtctggtccactgcagctgcggaagaccaag
cccagctctagcatgctgcagcaggtcttgatgagcgactatgccagtgtcccagcaccc
gtcggagaccagggcacgaatgttgctgccctagtgacagatgttgccatagtaactgct
gccagcgtggtgcctgctgaccccgagaggctggtggcagagttggcactgccccccgag
tcctccctgcttccctctgcaccctcgctcgcccccatccctgtcctcgccacacaacca
tcctccccctctagtgcccccggcaaccccacccctccggtgctgccctctgcttcctcg
tccgtcgtcatggttacgtcaacccctgctcagctcctgccggtgagctccaccacccag
cccgtgctggccctcctgcctacggaagcttccaccagtggagcagagacaggcactgat
aaagccccacaagggaacgaggcccaggtgaagacagtcctgccaaactggcgaggtgct
gtccccatctgtctgagtagtgctgaatctctccagaaccagacttccgctggagggccg
cccgtgggtgaaatgtcccttgcaggccccactactgacttgctctctccgatcccaaca
ctacaggcgttcgccgcgtccgtgaacgagcctgccattcagtcatacagtatcatcccc
aatgcagtggtgatcgagtgtacagtctctctagagtcctcacagacatttgttcccacc
tttcctgggagcaccatagagtctccctatggtaaaatcattcttgggccttcagagcat
ctgcagccttacactacacctcagcttcaagcccctaaacctacagcaccccttgctgca
ccggctccaaacactgaccccccttcacaatccgacccctcctcgtctactgccccccca
caacaggaaactgccccttcagctccttcctccatcaaagatgagtccaagagcagtgac
ggtgagccagtggagtcaaccactctgccccctgctgctccggaggcctcatcccaagca
gaggagaaagcagtcaaggaggagccagtgctggtgaatcctctgggcaacaacttcgtg
tgtaacgtctgctccaagcccttcccctccatgaaggagctgggccggcacattggcgag
cactccgaggcgtggccctacaagtgtgagttctgcgtccagctgtttgagagcgccaag
ctcttcctggaccaccgctccacctaccacggcatcgggaagatctacgtgtgctctgtc
tgctccaaggactttgccttcctgtgcaacctgcagcagcaccagaaggacctccaccca
ggccagacctgctcccacacggaggtggaggacggcaggctgcggccacagaactacaac
agccccaacaaagacagcacggcagcaggaccggatgccacctctgactccagcctgcag
gagaacgagagggtgacccgcaagaaggcggccaagaaggaggaagagaaggaggagaag
gaggaggagtttgacacggccactgaggagctttacactacgataaaaatcatggcatcg
ggaatgattcgatccaaaggtccggacgtgcgtctgggcatcaaccagcactaccctagc
ttcaagccgccgcccttcccttaccacaaccgcacgccaaccggctccgtcgcctctgcg
accaatttcaccacccacaacatccctcagaccttcagcacggccattcgctgtaccaag
tgcggccagagctttgacaacatgcccgagctgcacaagcacatcctggcctgtgctaac
gccagtgacaagcgccgctacacgcccaagaagaaccccatcccactaaagcagttcgcc
cgggcgcagaatggtgtgctctcaccaaccacggctgccaacatccgccagaacatctct
cgcaaggctgggcaggggggcaagcggcagaacgtgagccaggattccttggccaagctg
aagctgagcgcactaaacaagaggaaggcccagctggtacagaaggcggtttcccagagg
aacaagtctgctgctctgccgaagagaagctcggggactggggaggaagagcagggaagt
catgtatgcccccactgccggcgggagttcacctatcgtgccagcctcagcaagcacatc
gcactcagctgccccaacaaacccgtctccaagaaagcccggaagaggaaggagggagtg
ggaatgtccctcgttcaagagaacaatgccaacgtgcgcagacgtagtccagataccgtg
ggaaaacagcagggggcactgcagccccagagagccaagccagtcgtttcgggagctgga
gaccatgctggactgcctcatcttaataagggtgacatgaagaggtcggccatcttaata
gcagcaccggcccaccccataaagaggagcaaaaatgggccctcaagcgtcctgtccccg
atcccacagtccaactccccacatcggctgggccgcccactgcagaacggagaagaaccc
agaatccaaacccagaaccttcagacccaggctgcacagcagtcgatccccatcagggtg
cgggagaggaagggggggcctgtgacacgcagccttcagcaggcgcgctctatggtgccc
ccctctggtcaggtggaggctggaactgcaccccagcctgaagggcctcaggtggcattg
gcagggaggaaataa
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integrated database retrieval system
