Alosa sapidissima (American shad): 121712946
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Entry
121712946 CDS
T11137
Name
(RefSeq) zinc finger and BTB domain-containing protein 39
KO
K10511
zinc finger and BTB domain-containing protein 39
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121712946
04121 Ubiquitin system [BR:
asad04121
]
121712946
Transcription factors [BR:
asad03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
121712946
Ubiquitin system [BR:
asad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121712946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-C2H2_4
zf-C2H2
zf-H2C2_2
zf-C2H2_jaz
zf-C2H2_ZNF462_1st
zf-C2H2_14
zf-met
Motif
Other DBs
NCBI-GeneID:
121712946
NCBI-ProteinID:
XP_041953004
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Position
7:6870965..6878974
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AA seq
833 aa
AA seq
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MRIRLQGSSHAVRLLSELNRCRLSRLLCDVVLQVGGRSFPAHRAVLACSCTHFHSLFSQG
PRSTLSLDFVSAANFEKVLTFIYTGEIFTDLIDVRVLYELAERLGVRELVQACHATFPDL
QSSSVGQCGHERDLDPEAASAGVAMAASVCSSSAASCSSLSSSAAPTPATPSPFSQGRAS
RLGQPHAVSLSLSLSPKAEDAQSHVAYSQVPDSKPSSDAQQSHALAECPPVLPLQLKMEV
EEEEVASGCMEERTEKERGELENTQAVVSGTKTLAGTSVPLSRVSEACSFPDSSAQLGNE
TCAPSSSCAEPLDGLQMGPVEDGVVATIFEEEEAEERRRLQAGEQPEGAEQWRGLAEEII
ELSDEEERYLEEEEEDEDEEDLVFVENGSGNGSSGADDPSREAGMAAAAACKACGLALPA
DTTAIRAHAETHLTETGECRVCGAAFPEHGASVTHALSHVGILLFSCDMCQLQFSSQAKL
VRHRRQSEACYSLPSPDQLNSVTQSQGGEVQCAVCTKPFAKDFKAVREHLLTHVCVQSLR
CVVCQLSQPSLCALLWHALTHLSLAAFSCPVCACGFLERPLLDRHMVLHADTSILARGGG
PDGANGLEEDYRCFLCPQTFSSAATFHSHLSAHAGGELGLQGWMGARKRKHDTGLDFSSC
SSSSPMDGGGGGSGLGKLNLGFSLGMGLQDKVLQGGLPCFPGGLMPNSNDGSGGAMGGVV
KQKWYRCRYCGKRFAHSGEFTYHLRIHTGEKPYQCKVCLRYFRGRSTMICHLKTHSGALM
YRCTVCGLYFSTLKLVSSHMELHKDHLPPDFNIEQTFMYNDHSKEPLSNLDVP
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcaggctgcagggctccagtcatgcggtgcgtctcctctctgaactcaaccgc
tgccgcctgtcccgtctcctctgcgatgtggtgcttcaggtgggtgggcgctcctttcca
gcccatcgagccgtcctggcctgctcatgcacacacttccacagtctcttctctcaaggc
ccgcgctccactctctccctggactttgtgtcggcagccaactttgagaaggtgctcact
ttcatctacacgggggagatcttcactgacctgatcgatgtgagggtgctgtatgagctt
gctgagaggctgggtgtgagggaactggtgcaggcgtgccatgccaccttccctgacctg
cagagctcctccgtgggccagtgcggccacgagcgggacttggaccctgaggccgcatca
gctggtgttgccatggctgcctctgtgtgctcgtcctctgccgcgtcctgctcttcgctt
tcctcctctgctgccccaactccagccaccccgtcacctttctctcagggcagagcctcc
aggttgggccaacctcatgccgtgtccctttcactctccctgtcaccaaaggctgaggac
gcacagtcacacgttgcgtacagccaggtgccagacagcaagccctcctcagatgcacag
cagtcgcatgcattggcagagtgtcccccagtgctccctcttcagctgaagatggaagtg
gaggaagaggaggtggccagtggatgtatggaagaaaggaccgagaaagagcggggtgag
ctggagaacacacaagcagtggtcagtgggactaaaacgttagcgggtaccagtgtccca
ctgagcagggtctcagaggcctgctccttcccagattcctctgcccagctgggcaacgag
acctgtgctccgtcctcctcctgtgcagagcctctggacggcctgcagatggggccagtg
gaggatggagtggtggccaccatctttgaagaggaggaggctgaggagagaaggaggttg
caagccggggagcagccagagggggctgagcagtggagagggcttgccgaggaaatcatc
gagttgagcgacgaagaggagcgctacctggaggaggaagaggaggacgaggatgaagaa
gatctggtgtttgtcgagaacggcagtgggaatggcagcagcggcgcggatgatccatcc
agagaggcaggcatggcagcggcggcagcatgtaaagcctgtgggctggcactcccagca
gacaccacggccatccgggcccacgccgagacgcacctgacagagacaggcgagtgccgc
gtgtgtggagcggccttcccagagcatggcgccagcgtcactcacgccctctcgcacgtg
ggcatcctgttgttctcttgtgacatgtgccagctgcagttcagcagtcaggccaagttg
gtgcgccaccgccggcagtcggaagcttgttacagcctcccctcccccgatcagctcaac
agtgttacccagagccaagggggagaagtgcagtgtgccgtatgcaccaaaccttttgcc
aaagacttcaaggctgtacgagagcacctgctgacccacgtttgtgtccagtctttgcgc
tgtgtggtgtgccaactgtctcagccctccctctgtgccctgctgtggcacgccctcaca
cacctctccctggctgccttctcctgcccggtgtgtgcctgtggcttcctggagcgcccc
ctgctggacaggcacatggtgctgcatgccgacacctccatactggccaggggaggaggg
ccagacggcgccaacgggctggaggaggactaccgctgcttcctgtgcccacagaccttc
agctcggccgccaccttccatagccacctgagcgcccacgccgggggagagctgggcctt
cagggctggatgggcgctaggaagcgcaaacacgacacagggctggacttctcatcctgc
tcgtcctcctccccaatggatggtggtggaggaggcagcggtctgggcaaactcaacctg
ggcttcagcctgggcatgggtctccaggacaaagtgctccagggagggttgccctgcttc
cctggcgggctgatgccgaacagcaatgacggctcaggcggtgcgatgggtggagtggtg
aagcagaagtggtaccgatgccgctactgcgggaagcgctttgcccactcaggcgagttc
acgtaccacctccgcatccacaccggggagaagccctaccagtgcaaggtgtgcctccgc
tacttccgtggccgctcaaccatgatctgccacctgaagacccactctggcgcgctcatg
taccgctgcactgtctgcggcctctacttctccacgctcaagctggtctcctcacacatg
gagttgcacaaggaccatctgcccccagacttcaacatcgagcagaccttcatgtataac
gaccactccaaagagcccctgtccaacctggatgtcccctga
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