Alosa sapidissima (American shad): 121712976
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Entry
121712976 CDS
T11137
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121712976
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
MAGI_u5
PDZ_2
WW
MAGI_u1
Guanylate_kin
DUF6288
PDZ_Tricorn
DUF4907
Motif
Other DBs
NCBI-GeneID:
121712976
NCBI-ProteinID:
XP_041953078
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All DBs
Position
7:complement(13668079..13805923)
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AA seq
1654 aa
AA seq
DB search
MSKVILKKNHWTNKVNECSLCKNGRGELTVELRGGAENGEFPYVGEVREDAVLYQYGQLS
DGELVLEVEGLAVSGLPLYDVLTIIKTRKSPIRFKTVRQGHRLNKDLKHYLSLRFHKSSP
DHELQQIIRDNLYRHAVPCTTRPPREGEVPGVDYNFLSVQDFLELEQSGTLLEVGTYEGN
YYGTPKPPSQPPCGTVITQDALRDGLTGSQNSTPKRTKSYNDMQHARVVPVDNGDDDIAA
DMNNTFTEFLARSLFPSPLLCAGDTGRQEVHGVVRESAPSYALNNAIASPPVTPASPHHA
QLPPEEDPLGPLPDNWEMAYTENGEVYFIDHNTKTTSWMDPRLDKEQKPQEECEDDEEGV
HTEETDNELELPPGWERIDDPVYGVYYVDHINRKTQYENPVLEARRKQQLQSHQPPEGER
YIREWIEEHSSAGAPLASYAPNHLETYRDPQPGPTLPPAPGIKRGKPFFTRNPAELKGKF
ISTKLKKSHRGFGFTVVGGDEPDEFLQIKSLVLDGPAAVDGKMETGDVIVSVNDTIVLGY
THAQVVKIFQSIPIGSMVELELCRGYPLPFDPDDPNTSLVTSVAILDKEPIIVNGQEAYE
PPQAALGGPPGIMGMGVGAAIPGPQAGSLNGSREPLLPYGSGAMETMGGGIAGIAGMGGS
DGCLGYSSDVVTLASSIATQPELITVHLEKGDKGFGFTIADSLTGGGQRVKQIVDYPRCR
GLKEGDILVEVNKRNVQNMSHNQVVDLLSKCPRGSEVTMLVQRGEGVVPPKRSPKVVQLE
RKDSQGSSQHSVCSQRSVHTDSPLRAVPCMPTLPPDAVVAVPPPPNQPLPSLPPHDPPPD
ATLQKKPDPFKIWAQSRSMYESRMPDSQEQDIFLWRKDTGFGFRILGGNEPGEPIYIGHI
VKYGAADEDGRLRSGDELICVDGTAVVGKSHQLVVQLMQQAAKQGHVNLTVRRKAGFVCK
GEGDVPPSPASSHHSSTQAPSLTEEKRTPQGSQNSLNTVSSGSGSTSGIGSGGGGGSGSA
VVSVALQPYDVEIQRGENEGFGFVIVSSVSRPDAGTTFAGNACVAMPHKIGRIIEGSPAD
RCGKLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNASLLTNAEKI
ATITTTHTPQNEPRNNAKSKQAPQTGQTQSNQDAEYYSVDLERDSKGFGFSLRGGREYNM
DLYVLRLAEDGSAVRNGKMRVGDEILEINGESTKNMKHSRAIELIKNGGRRARLVLKRGD
GSVPEYDGPNDGYPPSPGKNLSEVRTLPPNSRFHIPSESSYSPDYHTPPRHMEQWRERES
EREREDRRDYARAPASQQQQYQQQQQQQQQHHLLSSQHHPQHHITWNNQQPPSPPPTDDP
KKSNRRKVKKSESESGIAKLFKTLRKEGGFGRKSSERDGSGTLGRRGGRSPERKAHGGAQ
ARRGSLDRSPTRHRNSSPDRRRAKSMDRRAEYRDRTPERASATSSRQSSHAQLLRLAHTP
ERPVFYRPPGREPHTPGRSSLLSRDALSTPERANNGQAMTAAASMASMAGRGRTPERGLK
NGNVLRDSGGAERDDPWGLGTPERRYRCESTSDSSCSSYRDDPPAARLKDYYSTNTLKSC
GSNGYPGTRGPAGQPHVPEPKRRLYKENHTDLSI
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagtgatactcaagaaaaaccactggaccaacaaagttaacgaatgttcattg
tgcaaaaacggtcgcggagagttgaccgtggaattgcgcggcggtgcggagaatggagag
tttccgtacgttggggaagtgcgagaggatgcggtgctttatcaatacgggcagctgtcc
gacggggaattagtgttggaggtcgaaggcttggctgtgtctggactgcccctatatgat
gtgctgaccattataaagactcgcaaaagtcctatcaggtttaaaactgtaagacaaggc
caccgtctgaacaaggacctgaagcactacctgagcctgcgcttccacaagtcctcgccg
gaccatgagctgcagcagatcatcagggacaacctgtaccgtcacgctgtgccctgtacc
acccggccaccacgggaaggagaggttccgggggtggactacaacttcctgtccgtgcag
gacttccttgagttggagcagagtggcactcttctggaagtaggaacttacgaaggtaac
tattatggaacacccaagccgccaagccagcccccctgtgggacagtgattacccaggat
gcactgcgagacggcctcacaggttcccagaattccacccccaagcgcaccaagtcctac
aatgacatgcaacatgcaagagtagtgccagtggacaacggggatgacgacattgctgca
gacatgaacaacactttcacagagttcttagcgcgtagtctcttcccatctcccctgttg
tgtgcaggagacactggccggcaggaagtgcacggcgtcgtacgagagagcgccccctcc
tacgcgctcaacaacgccatcgcctcgccaccggtcacccccgccagcccccatcatgcc
cagctccctcccgaggaggaccccctgggcccgctgcctgacaactgggagatggcctac
acagagaatggagaggtctacttcatagatcacaacacaaagacgacctcatggatggac
cctcgcctcgacaaggagcagaaacctcaggaggagtgtgaggatgatgaagaaggtgta
cacacagaagagaccgacaatgaactagaattgccgcctggttgggagaggatagatgac
cctgtctatggagtgtactatgtagatcacattaacaggaagactcagtatgagaatccg
gttctggaagctcgccgtaagcagcagctccagtcccatcagccacctgaaggtgagcgc
tacatccgagagtggatagaggagcattcgtcggctggagccccactggcctcgtacgct
cccaaccacctggagacctacagagacccccagccaggacccaccctgcctcctgccccg
ggcatcaaacggggtaagccgttcttcacccgtaacccggccgagctgaaggggaagttc
atcagcaccaagctgaagaagagccatcgcggcttcggcttcaccgtggtggggggagac
gagcccgacgagttcctgcagatcaagagcctcgtgctggatggacctgccgctgtggac
ggcaagatggagacaggtgatgtgatcgtgagcgtgaacgacaccatcgtgctgggctac
acgcacgcgcaggtggtcaagatcttccagtccattcccatcggctctatggtggaactg
gagctgtgccgcggctacccgctgccctttgaccccgacgaccctaacaccagcctggtc
acctcggtggccatcctggacaaggagcccatcatcgtcaatggccaggaggcctacgag
cctccccaagctgccctcggtggacccccaggcatcatgggtatgggcgtcggtgctgcc
atacctggcccccaggccggctcgctcaatggcagccgtgagccgctcctcccctacgga
tcgggcgccatggaaacaatgggcggcggcatcgccggaatcgccggcatgggcggcagc
gacggttgcctgggctacagcagcgatgtggtgacgttggcgtccagcatcgccacgcag
cccgagctcatcaccgtgcacctggagaagggcgacaagggcttcggcttcaccatcgcc
gacagcctgaccggcggcggacagcgcgtcaagcagatcgtggactacccgcgctgccgc
ggcctcaaggagggcgacatcctggtggaggtcaacaagcgcaacgtccagaacatgagc
cacaaccaggtggtggacctgctcagcaagtgccctcgcggcagcgaggtcaccatgctt
gtgcagagaggtgagggagtggtgccgcccaagaggagccccaaagtggtgcagctggag
aggaaggacagccagggcagctcgcagcacagcgtgtgcagccagcgcagcgtccacacc
gactcgccgctgcgagccgtgccctgcatgcccacgctgcctccggacgccgtggtggcc
gtgcccccgccgcctaaccagccgctgcccagtctgccgccccacgacccgccgcccgac
gccacgctccagaagaagcccgaccccttcaagatctgggcccagtccaggagcatgtac
gagagccgcatgccagactctcaggagcaggatatattcttgtggaggaaggatacaggt
tttggcttcagaatactgggtggaaatgaaccaggagagccgatctacattggtcacata
gtgaagtacggggcggcggacgaggacgggcggctacgctctggggacgagctgatctgt
gtggacggcacagcggtggtgggcaagtcccatcagctggtggtgcaactcatgcagcag
gccgccaagcagggacacgtcaacctgaccgtacgacgtaaggcaggattcgtgtgtaag
ggcgagggcgacgtgcctccatccccagcctcctctcaccacagcagcacgcaggcgccg
tcgctgaccgaggagaagcgcacgccgcagggctcgcagaactccctcaacacggtcagc
tcgggctcgggcagcaccagcggcatcggcagcggcggcggcggcggctcgggcagtgcc
gtggtctccgtggcgctgcagccctacgacgtggagatccagcgcggcgagaacgagggc
ttcggcttcgtcatcgtctcgtctgtctcacggcccgatgccggcaccacgttcgctgga
aatgcatgtgtggccatgccccataaaatagggcgcatcatcgagggcagtccggctgac
cgctgcgggaagctgaaggtgggcgaccgcatcctggccgtcaacggctgctccatcacc
aacaagtcccactccgacatcgtcaacctgatcaaggaggccggcaacaccgtcaccctg
cgcatcattcccggggacgaatcctccaatgcctctctcctaaccaacgctgagaagatt
gccaccatcaccaccacacacacaccgcagaacgaacctaggaacaacgcaaaatccaaa
caggctccccagacagggcaaacacagtccaaccaggatgcggagtactactcggtggac
cttgaaagagacagtaaaggttttggcttcagtttgagagggggccgtgagtacaacatg
gacctgtacgtgctgaggctggccgaggatggatcggccgtacgaaacggcaagatgagg
gtgggagatgagattctggagatcaacggtgagagcaccaagaatatgaagcattcgcgc
gccatcgagctcatcaagaacggagggcgccgcgcacgcctcgtcctcaagaggggcgat
ggctccgtgcccgaatatgacgggcccaatgacgggtaccctccctcacccgggaaaaat
ctttcggaagtgagaactctgccgccaaacagccgattccacattccatccgagtccagc
tactcacccgactaccacaccccaccacgacacatggagcagtggagagagagagagagc
gagagagagagggaggacaggagggactacgcacgggccccagcgagccagcagcagcag
tatcagcagcagcagcagcagcagcagcagcaccatcttctatcttcccagcaccaccct
cagcaccacatcacctggaacaaccagcagccaccgtcgccaccgcccacggacgacccc
aagaagagcaaccgccgcaaggtgaagaagtccgagtcggagagcggcatcgccaagctc
ttcaagacgctgcgcaaggagggcggcttcggacgcaagtcgtccgagcgggacggtagc
gggaccctgggccggcgcggcgggcgctcccccgagaggaaagcccatggcggggcgcag
gctcgccgcggctccctggaccgctcgcccacgcgccaccgcaactcctcgccggaccgg
cgccgtgccaagtccatggaccggcgggcggagtaccgcgaccgcacgcccgagcgcgcg
tccgccacctcctcccgccagtccagccacgcccagctcctgcgcctggcccacaccccc
gagcggccagtgttctaccggccgccaggacgcgagccccacacgcccggccgcagctcg
ctgctctcccgggacgctctctccaccccggagcgggccaacaacggccaggccatgacg
gcggcggcaagcatggcgagcatggcgggccgtggacgcacccccgagcggggcctgaag
aacgggaacgtgctgcgagactcgggcggcgccgagcgcgacgacccctggggcctgggc
acacccgagagacgctaccgttgcgagtccacctcggacagcagctgcagcagctaccgc
gacgaccccccggctgctcgcctcaaggactactacagcaccaacacgctcaagtcctgc
ggctcgaatggctaccccggcacccggggccctgccggccagccccacgtccctgagccc
aagagacggctgtacaaagagaaccacaccgaccttagcatctga
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