Alosa sapidissima (American shad): 121712990
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Entry
121712990 CDS
T11137
Symbol
ybx1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121712990 (ybx1)
03019 Messenger RNA biogenesis [BR:
asad03019
]
121712990 (ybx1)
03041 Spliceosome [BR:
asad03041
]
121712990 (ybx1)
Transcription factors [BR:
asad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
121712990 (ybx1)
Messenger RNA biogenesis [BR:
asad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
121712990 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
121712990 (ybx1)
Spliceosome [BR:
asad03041
]
Common components
Common spliceosomal components
General mRNP proteins
121712990 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121712990
NCBI-ProteinID:
XP_041953127
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All DBs
Position
7:complement(34822758..34829860)
Genome browser
AA seq
316 aa
AA seq
DB search
MSSEAETQQPPQPAADAESPSSPAAAATAGDKKVIATKVLGTVKWFNVRNGYGFINRNDT
KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA
DRNRYRRYPRRRGPPRDYQDNFQSDGDGEGEVREKREGGAESAPEGEGPAQQRRPSYPGR
RRYPPYFVRRRYGRRPPYSSAPRGEMTEGGEGDDNQGGQDQGNKPVRQNYYRGFRPRFRP
SRGPPRPRPVREGEEDKENQGDGAQSQEPRQRRYRRNFNYRRRRPQTGKPQDGKEGKASD
APADKPAPEAEQAGPE
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacacaacaaccgccgcagcctgccgccgatgcggagagccca
tccagcccggcagccgcagctaccgcgggggacaagaaggtcatcgcaacaaaggtcctg
gggacagtgaagtggttcaacgttcggaacggctatggtttcatcaacaggaatgacaca
aaagaagacgtctttgtacaccagactgccataaagaaaaacaacccaaggaagtatctc
cgcagcgtgggggacggagagactgtagagtttgatgtggtcgaaggggagaagggtgca
gaagcagcaaatgtcaccggcccaggcggagtcccagtccagggcagcaagtacgcagcg
gaccgtaaccgctaccgacggtacccacgccggagagggcccccgcgcgactaccaggac
aacttccagagcgatggagatggcgagggggaggtccgggagaagcgcgagggaggagcg
gagagcgccccggagggggagggtccggcccagcagcggcgcccctcctaccccggcaga
cgcagatatcccccttactttgtgcgccggcgctatggacgcagacccccctacagcagc
gccccccgtggggagatgaccgagggtggagaaggagacgacaaccagggtggtcaagac
cagggcaacaaacctgtgcggcagaactactacagaggcttcaggccaaggttcagaccc
agtaggggcccgccacggccgcggccagtgcgtgagggcgaggaggacaaggagaaccag
ggtgacggcgcgcagagccaggaaccccggcagcggcgctacagacgcaacttcaactac
cgccgcagacgcccccagaccggcaagcctcaggacggcaaggagggcaaggcctccgac
gcccccgccgacaagcccgctcccgaggccgagcaggccgggcccgagtaa
DBGET
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