Alosa sapidissima (American shad): 121713056
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Entry
121713056 CDS
T11137
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asad03400
]
121713056 (apex2)
Enzymes [BR:
asad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
121713056 (apex2)
DNA repair and recombination proteins [BR:
asad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
121713056 (apex2)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
121713056
NCBI-ProteinID:
XP_041953261
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Position
7:complement(16872812..16879018)
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AA seq
600 aa
AA seq
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MTFAPQVFAIKCADESRHVKMKIVTWNINGIRTFKNAIKKTLDSFDAEIICVQETKVTRD
LLDEKTAIVEGYNSYFSFSRGRSGYSGVATFCKDSATPFAAEEGLTGLLTNNGEAVGCYG
DQKEFSNEELQLLDNEGRAVITQHQIRGPDGPQTLAVVNVYCPRADPEKPERKLFKLQFY
QLLQARAEALLASGCHVIVLGDINTSHRPIDHCDPDDIDNFEDNPGRKWLNGFLFGVTEE
EQDVGSDHDPDFSRKPTECGGKFVDTFRFFHPSRPQAFTCWNTLTGARQTNYGTRIDYIF
GSCALVETHFVGVDIMPEVEGSDHCPVWGHLGCEVVPSARCPPFCTRYMPEFVGKQQKLS
RFLVKMADQKPNVVESKEAKDTTLPGSQETEEIRENLHPLGLGSSAGRKRGPDGIAESSA
PKGKKSKVAKATPAKPQGSLLAFFKPKGPTAEQKPKISAELTARTKDTAAENSNSHAGRN
SDSPLVSGPNMNNPSGKGVSDQNSTVEVSGQEPDEGGAAPPVEGGASKKEACLPSFWKAV
LRGPPQPPPCKVHNEPCVLRTVKKAGPTMGRQFFVCARPQGHASNPQARCNFFAWVDKGK
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgcccctcaagtgttcgccatcaagtgtgcagatgagtccaggcacgtaaaa
atgaagattgtgacttggaatatcaacggtatacggacatttaagaatgcaatcaagaaa
acactggattcatttgatgctgaaattatttgtgtccaagaaacaaaagttacaagggac
ctgcttgatgaaaaaacagcaattgtagaagggtataactcgtacttcagcttcagcaga
ggacgcagtggttactcaggggtggcaaccttttgcaaggacagtgccactccgtttgct
gcagaagaaggtttgactggcctcttgaccaacaatggggaagctgttgggtgctatggt
gaccagaaagagttctccaatgaggagctgcagttgcttgacaatgaggggagagctgtc
atcacacaacatcaaattaggggtccagatggaccacagacactggccgttgtgaacgtg
tactgccctcgggctgacccagagaagccagagcgcaaactcttcaagctgcagttctac
cagctgctgcaggcgcgggctgaagcactgctggcatctgggtgccatgtgattgttttg
ggcgatatcaatacttcccaccggcccatagaccactgtgatcctgatgacattgacaat
tttgaggacaaccctggcaggaagtggcttaatggtttcctgtttggggtcacagaggag
gaacaggacgtcggctcagatcatgatcccgacttctccaggaagccgaccgaatgtggc
gggaagtttgtcgacaccttccgattcttccacccgtcccgtccgcaagctttcacctgt
tggaacacgctcacgggagcgcggcagaccaactacggcacgcgcatcgactacatcttt
ggcagctgtgccctggtcgagactcacttcgtaggagtggacatcatgcccgaggtggag
ggatcggaccactgtcctgtctggggacacttgggttgcgaggttgtgcccagtgcccgc
tgtccgcctttttgcacacgctacatgcccgagtttgtgggcaagcagcagaagctctcc
cgcttcctggttaagatggccgaccagaaaccaaacgtggttgagtccaaagaagccaaa
gacacaactcttcctggctcccaggaaacagaggagatccgagagaacctgcaccccctc
ggtttggggtccagtgccgggaggaaacgggggcctgatgggatagccgagtcctccgcg
ccaaaggggaagaagagcaaagtggcaaaggcaacaccagcaaaacctcagggaagcctt
ctggccttcttcaaacccaaagggcctactgcagaacaaaaaccaaagatctccgctgag
ctcacggctaggactaaggacaccgctgcagaaaactccaacagccatgcagggaggaat
agtgactccccactggtgtctggacctaatatgaacaatccaagtgggaagggagtatct
gatcagaacagtacggtagaggtcagtggccaggagccagacgagggtggagcggcacct
ccggtggagggcggagcttcaaagaaagaggcatgcctgcctagtttctggaaggcggtc
ctacgaggtccaccgcagccacctccctgtaaggtccacaatgagccctgcgtcctgcgc
actgtgaagaaggcggggcctaccatgggccgccagttctttgtttgcgccagaccacaa
ggccacgcctccaatccccaagccaggtgcaacttctttgcttgggtggacaaagggaag
tag
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