Alosa sapidissima (American shad): 121713087
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Entry
121713087 CDS
T11137
Name
(RefSeq) transcription factor HES-5-like
KO
K06055
hairy and enhancer of split 5
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121713087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121713087
Transcription factors [BR:
asad03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
121713087
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Paralog
GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_IRO3
CEP76-C2
Di19_C
KH_6
Motif
Other DBs
NCBI-GeneID:
121713087
NCBI-ProteinID:
XP_041953328
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All DBs
Position
7:complement(9110946..9111862)
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AA seq
222 aa
AA seq
DB search
MWQVSIAHCHPRPSHWLQTVRTSSKPKTHTFIWRSGSINRRRRGAVSSRAQAPLQRDHSR
DTAMAPTVTVPMTYSSEHLTLNNKQRKPLVEKLRRDRINNSIEHLKTLLGQEFLKQHPDS
KQEKADTLEMTVHFLKQKQQQQPSTCSTAANEGYSRCMQDAVNFLSQCEVQTQSQRRLLS
HFLHMLPTADKSTRVQLQPSSPVRHSSSKQKTSGCTALWRPW
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaggtctccattgctcattgtcatcccagaccctctcattggctgcagactgtg
agaacctccagcaaacccaagacccacacattcatatggagatctgggagtataaatagg
agaaggagaggagcagtcagtagcagagctcaagctcctcttcagagagaccacagcaga
gatacagccatggcacctactgtcactgtacccatgacctactcttctgagcatcttaca
ctgaacaataagcagagaaagcctttggtggagaaactgcgcagagatcgcatcaacaac
agcattgaacatctcaagactctactgggccaggagttcctaaagcaacatccagactcc
aagcaggagaaagctgacaccctggagatgactgtccacttcctgaaacagaagcagcag
cagcaaccctccacctgctccacagcagccaatgagggctactccaggtgtatgcaggac
gctgtcaactttctgtcccagtgtgaggtgcagacacagtcccagagaagactgctgagt
cacttcctacacatgctgcccacagcggacaagagcaccagagtccagcttcagcccagc
tctccagtccgtcacagcagcagcaaacagaagacttcaggctgcactgcactctggagg
ccctggtag
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