Alosa sapidissima (American shad): 121713090
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Entry
121713090 CDS
T11137
Name
(RefSeq) transcription factor HES-5-like
KO
K06055
hairy and enhancer of split 5
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121713090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121713090
Transcription factors [BR:
asad03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
121713090
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Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
121713090
NCBI-ProteinID:
XP_041953333
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Position
7:complement(9135607..9136964)
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AA seq
173 aa
AA seq
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MAPYTATLSIPTYDSLSLTDKDRIKLRKPLVEKMRRDRINTCIEQLKSLLEKEFQSQDPN
AKLEKADILEMTVSFLRRQRHPGPVQSQRDYKEGYSQCWRESMQFLNASSSRGVPFREHH
ISPQRAPQDLSSSSSSSSSSSFPSASSPVTSKQSSVSIIHHAGSKRPVWRPWQ
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggcaccctacacagccactctctccatacctacatatgacagcctgagcctcactgac
aaggacagaataaaattaaggaaacccttagtggagaagatgcgcagagatcgcatcaac
acctgcatagagcagctcaagtccctgctggagaaggagttccagagccaggacccaaac
gccaagctggagaaggccgacatcctggagatgacggtcagcttcctgcggcggcagcgg
catcctgggcctgtgcagagtcagagggactataaggagggctactcccagtgctggagg
gagtccatgcagttcctcaacgccagctccagcagaggagtgcctttcagggaacaccac
atcagccctcagagagcccctcaggacctctcctcttcatcctcttcatcctcgtcctcc
tccttcccgtccgcctcgtctcctgtcacctccaaacagagctcagtcagcatcatccac
catgctgggagcaagaggcctgtttggaggccgtggcagtaa
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