Alosa sapidissima (American shad): 121713153
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Entry
121713153 CDS
T11137
Name
(RefSeq) IQ motif and SEC7 domain-containing protein 1-like isoform X1
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
asad
Alosa sapidissima (American shad)
Pathway
asad04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121713153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121713153
Membrane trafficking [BR:
asad04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121713153
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
IQ_SEC7_PH
SOS1_NGEF_PH
bZIP_2
Shugoshin_N
PH_19
RHG20_PH
Phage_scaffold
Motif
Other DBs
NCBI-GeneID:
121713153
NCBI-ProteinID:
XP_041953461
LinkDB
All DBs
Position
7:33130753..33245336
Genome browser
AA seq
1394 aa
AA seq
DB search
MERRLTFQGAGSPYGNEMESPIDNPNKAAEYLKELNKIIETQQELLEKQKIRIEELEQQV
TELCNENACLKDEYQRHLLTCRLQQGNCHSALGSIQENATQEKLQCENTKMVRRHASLPL
EAIESPGSLISPVCRRPFPCRQWKSASFGSQTPWIQLPGVTDLHSSVTSPAVLDAQADGF
YCRAQTWPAPSTLSEPPAQLDPLGHLKRKELLTAEPHETFIPGVEGDVQSGEPGSSLDSG
ANYSQGPVTRSSSISPDQFDGAIYGHPVQPGPQRPRRPKLQHSQSILRKQAEEEAIKRSR
SLSESYELSTDLQDKQVEMLERKYGGRFITRHAARTIQTAFRQYQMNKNFERLRSSMSEN
RMSRRIVLSNMRMQFSFEGPEKVHSSYFEGKQVSLTDDGGQLGAMVEECSELEDSGNMAS
PAAQSDLTDAITELEDAFSRQVKSLAESIDDALNCRSLHGEEGPSEQAMGRQEVEPEIVY
QIRPAHAPNRHKLDDMMASYSDVTLFIDEEELSPPIQLARSSLDQPSSTESDQRGQSISS
SQEYWPLDPKDDKDTDTSCRSTPSVECHEQQPQQRLRVDHLPLLTIEPPSDSSVELSDRS
ERSSVKRQTVFERTVVGPPQASPKHISHGLPPRVPVPQRGDDDHPIRHRHRQLESHLAIN
GNRQSKSESDFSDGDNDSINSTSNSNDTINCSSESSSRDSLREQTLSKQTYHKETRNSWD
SPAFSNDVIRKRHYRIGLNLFNKKPEKGIQYLTERGFVPDTPVGVAHFLLQRKGLSRQMI
GEFLGNRQKQFNRDVLDCVVDEMDFSGMELDEALRKFQAHIRVQGEAQKVERMIEAFSQR
YCICNPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFIKNLRGVDDGED
IPRETLVGIYERIRKRELKTSEDHVSQVQKVEKLIVGKKPIGSLHHGLGCVLSLPHRRLV
CYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVT
LFENQHYPNGIRLTSAIPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQEMEKYRIES
ELEKQKGVVRPSMSQSMSGLKKEAGNGSMSRASLDDTYAMGEGLKRSALSSSLRDLSEAG
KRGRRSSAGSLDSNMEGSTISSPHIRRRVTAHECSSRGHPPVPNSSSLLGSLFGSRRGKS
SSSSSSQGHPPPPPSSHPTLIAHTPHPANLHHTAHAEGHGTHHHQHHQHYSHRGEQNPPP
YHHHHHYHPPSSSSHSRREAPPSSSSHSHLFHQQSSHASHSSSSSSHAPPSQYPGYGSHA
HTHTHTRAHSHAHGHSGHGQHTSHMSHSSHSQHAPPSSSSSHHHHHHLHGQQGAPAGPGP
SNSKTKHSGISTVV
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atggagagacgactgacatttcagggcgcgggcagcccgtatgggaacgagatggagagc
ccaatcgacaacccaaacaaggctgccgaatatctgaaggagcttaacaaaattattgag
acccaacaggagttgctggagaagcaaaagattcgcattgaggagcttgagcagcaagta
acagagctgtgcaacgaaaatgcctgtctgaaagacgaataccagcggcatctccttact
tgcagattgcaacagggcaattgtcattcggccctgggatctatacaagaaaacgccact
caagagaagttgcaatgcgaaaacacaaagatggtcagaagacacgcatctcttcccctg
gaagccattgaaagcccaggcagtctcatatcaccagtgtgcagaagacccttcccatgt
cgccagtggaagtccgcttcttttggaagtcagacaccatggatacaacttccaggtgtg
accgacctgcacagctccgtgacaagccctgcggtgctggacgcccaggcagacggtttc
tactgcagggcgcagacatggcccgcgccctctaccctctcagaaccgcctgcccagctg
gaccctctcggacacttgaaacggaaggagcttttgactgcagaacctcatgaaacattc
atcccgggtgtggagggagatgtccagagcggtgagcccggctcgtccctggacagcggc
gccaactacagccagggtccagtgacccgcagctcgtccatcagcccggaccagttcgac
ggggccatctacggccacccggtgcagccgggtccacaaaggccccgacggcccaaactg
cagcactcgcagtccatcctgcgcaaacaggccgaggaggaggccatcaagcgctcgcgc
tcgctctccgagagctatgagctctccaccgacctccaggacaaacaggtagagatgcta
gaacgcaaatatgggggacggttcataacacggcatgctgcacgcaccatccaaacggcg
ttccgtcagtatcagatgaacaaaaactttgagcgcctgaggagttctatgtctgagaac
cgcatgtctcggaggatcgtgctgtccaatatgagaatgcagttttcctttgaaggacct
gagaaagtccacagctcctacttcgagggcaagcaggtatcgctgacggacgatggcggt
cagctgggagcaatggtggaggagtgcagcgagctggaggattctgggaacatggcgtcc
ccggccgctcagagtgacctgacggacgccatcaccgagctggaggacgccttttcccgg
caggtgaaatcgctggcggagtccatcgatgacgcgctgaactgtcgcagtctccacggc
gaagagggcccttcggagcaggcgatgggtcgccaggaggtggagccggagatcgtgtac
cagatcaggccagcgcacgcgcccaatcggcacaagctggacgacatgatggcctcctac
agcgacgtgactctcttcatcgacgaggaggagctctcgccgcccatccagctcgcgcgc
tcgtccctggaccagccgtccagcaccgagtcggaccagcgcggccagtccatcagctct
tcgcaggaatactggccgctcgaccccaaggacgacaaggacacggacacgagctgccgg
agcacgccctcagtggagtgccatgagcagcagccgcaacagcgactgcgggtggaccac
ctgccactgctgaccatcgaaccacccagcgacagctcggtggagctcagcgaccggtcc
gagcgcagctccgtcaagcgacagacggtgttcgagcgcacggtggtcggtccgccacag
gccagccccaaacacatctcgcacggactacctccccgcgtccccgtcccgcaacgcggc
gacgatgaccaccccatccgacaccggcaccggcagctcgagagccacctggccataaac
ggcaaccgccagagcaagtccgagtcggacttctcagacggtgacaacgacagcatcaac
agcacgtccaactccaacgacaccatcaactgcagctcggagtcgtcgtcgcgtgacagc
ctccgcgagcagacgctcagcaagcagacgtaccacaaggagacgcgcaacagctgggac
tcgcccgccttcagcaacgatgtcatccgcaagcgccactaccgcatcggactcaacctc
ttcaacaaaaagccagagaaaggtattcagtacctgacggagagggggttcgtccccgac
actcctgtgggagtggctcacttcctgcttcagaggaagggtctgagtcgacagatgatt
ggcgagtttctgggtaatcgacagaagcagttcaacagggatgtgctggactgcgtggtg
gacgagatggacttctcagggatggagctggacgaagccctcaggaaattccaggcccac
atccgggtgcagggggaagcacagaaggttgagcgcatgatagaagctttcagtcagcgc
tactgcatatgtaaccctggggtcgtgcgtcagttccgaaatccggacaccatcttcatc
ctggcatttgccatcatcctcctcaacacggacatgtacagtcccaacgtaaagccagag
aggaagatgaagctggaggacttcatcaagaacctccgaggcgttgatgatggcgaggac
atccctcgggagactctggtggggatttacgagcgcatccgcaagcgtgagctcaagacc
agcgaggatcacgtctctcaggtgcagaaggtggagaagctcatcgtgggcaagaagccg
attggatctcttcaccatggactgggctgtgtgctgtccctgccccaccgcagactggtg
tgttactgcaggctgtttgaagtgccagaccccaacaagccacagaaactaggcctacac
cagcgggagatcttcctgttcaacgacctcctggtggtgacgaaaatcttccagaagaaa
aagaactctgttacgtacagcttcaggcagtccttctctttgtatgggatgcaagtcact
ctctttgaaaatcagcattacccaaatggaatccggctcacgtcggccatcccaggtgct
gacatcaaagtcctcatcaacttcaacgctccaaatcctcaggaccgcaagaagttcaca
gacgaccttcgtgagtccattgctgaggtgcaggagatggaaaaatacaggatagagtcg
gagctggagaagcaaaagggagtggtgcggcccagcatgtcccagagcatgtcgggcctg
aagaaggaggcaggcaacggcagcatgagccgtgccagcctggacgacacctacgccatg
ggcgaggggctcaagaggagcgcgctcagtagctcactacgagacctctccgaagcaggc
aagcgtggccggcgcagcagtgcaggatcactagacagcaatatggaagggtccaccatt
agcagcccacacatccgccggagagtcaccgcccacgagtgctcctcccgcggccacccg
cccgtccccaactcctcctcccttctggggtccctcttcggcagtcggcggggcaagtcc
tcctcctcttcctcctcgcagggccaccctcccccgccgccctcgtcccacccgaccctg
atcgcccacacgccccacccggccaacctgcaccacacggcgcatgcggaggggcacggc
acgcaccaccaccaacaccaccaacattacagccacaggggggagcagaaccctccgccc
taccaccaccaccaccactaccaccccccgtcgtcctcttcacacagccggcgggaggcc
ccaccgtcctcatcgtcacactcacacctcttccaccagcagtcctctcacgcctcgcac
tcctcctcctcctcctcccacgctcccccctcgcagtacccgggctacggctcgcacgcg
cacacacacacacacacacgcgcgcactcacacgcgcacggtcactcgggccacgggcag
cacacgtcgcacatgtcgcactcctcgcattcccagcacgcgccgccctcgtcctcgtca
tcgcaccaccaccaccatcacctccacggccagcagggggcacctgcgggcccagggccc
agcaactccaaaaccaaacacagcggcatcagcactgtggtctga
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