Alosa sapidissima (American shad): 121713155
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Entry
121713155 CDS
T11137
Name
(RefSeq) zinc finger protein 335-like isoform X1
KO
K24371
zinc finger protein 335
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121713155
Transcription factors [BR:
asad03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121713155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_7th_ZNF462
zf-C2H2_16
zf-C2H2_6
C1_1
Actin_micro
ISP1_C
zf-C2H2_2
Hia_Tpr_ring_dom
Motif
Other DBs
NCBI-GeneID:
121713155
NCBI-ProteinID:
XP_041953472
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All DBs
Position
7:complement(21590485..21604192)
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AA seq
1566 aa
AA seq
DB search
MDSEEIEVESSSDVGPSGMEEPSESGMGVESSEAMSADSSDAAAPPLMAPESDCHVGQSS
EGIVVFIPETSSSTDVHGVHLPDSSSVAQSTSVSSVSTVTQSIIVSESAQVVVHSSAVSE
GGMMVSDSTASTSSDLGSAIDKIIESTIGPDIMNGCIAVTSAEDGSAETTQYLILQGPDD
GAPMVAQMSSSALSSRIAIEALADGPTSTCLDQVDMAEGIQGSLEPDQPDQPGHSGYPEH
EAGSSSSSSSSRRSSRPDQTGEVQYIECSSEQPDGSGQSSRFPDYSADNSDGPLQGYAEC
SGTDSSSPPRHTRYVVECSDGGYLECSTVESGSERPQHSHYIDSSVVPQRSSRYADCVTA
GPEQPGCSHYQERESTQPDQPRCSQDGPEHSGYMECSTGQGSLYADEGTSSQGSLADTAG
SSGLPVQMDCSESQSGTYISSSGTYSAQPETEVVQEWSPDAEAGQQADDMVAESGVEVGP
GDRAPNLAELEEMMEVVIVQQFKCKMCPYKSVSKDTLINHMRDRHFKPAGPPPKKRGRGR
PRRSDSVVRQVVEVKVEEPAEEEDDDIVDAGAIDDPEEDSDYSPADKEYRSRPSVSQRQA
PSSCPSSSQDRPRRRVGRPKKFSYFYGNQGRPEEAEGSSKTNGSVDARPSEEASSSGLGN
GTPSLANGSQAEPGVSQSDSENKDPSSNTGPDETEFYPRKRGRPSKRFLRKKYKKYMNRN
RYYKSLKPLLRPHNCWICGSRFLSQDDLRFHIESHEGNDPECFKCLQCNYRCKRWSSLKE
HMFNHEGTKPYKCEECDYTSVYKKDVIRHSAVHNKDKKKKPDLVPKISQFPCPICHRVYP
MQKRLTQHMKTHSNEKPHVCDKCGKSFKKRYTFKMHLLTHIQSCGNSRYEKTGFKCEFCE
YTCDNKKLLLNHQLSHTSDKPFKCDYCKYSTTKEDFLVSHMAIKHTGEKPFSCELCHFMT
KHRKNLRLHVQCRHPEAFEEWSQAHPEEPVRRRRRPFFTLQQIEDLKQQHEAQGLQNTIV
SVDPVTLQAMHGIDNASVAQDAQGNTTIIYEQGSSDLSAQNALDLLLNMSNARELVGNSL
QVAVLKSDGKTLEPGTWVEAEEGTQSTSLQSQKVVTFHVAENGETLVQEAFESSMGEAGG
EITQIAISAYEGSGDFSVVEQAAEEIHSTDPSYSSAEDVPTDAQPMEVSSDGASDSGTLR
EHKDKFYLSSGLTEGVMQQVELSSEASGSPSSRQQLNTKRFSCRICMESFHGRSDMENHK
RAHIDPSTFKCPDCEFTAASWPEVKTHMALHSYLRPHKCTSCSFASKNKKDLRRHMMTHT
NEKPFACEICGQRFNRNGHLKFHMERLHSQDPPVRKPRPGTSQQTIIVNSDEEALATLQS
ALQAGQTVISPEQLQQALGQEHIIVAQEQTLSDQEEATYIQQITTVDGQTVQHLMTADNQ
VQYIISQDGVQHLIPQEYVVVSDGNHIQMPDGQIAQIQYEHDGTFLQEQQIALTHDGQIQ
YVPLNSEQQIVSHEDLEAAAHSAVTAVADAAMAQVQTVYTTEATPEQLEQMQQQGIHYDV
ITFSED
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atggattccgaggagatcgaggtggaaagcagcagtgatgtgggcccttctggaatggaa
gagccgtccgagagtggcatgggcgtggagtcatcagaagccatgtctgctgacagcagc
gacgctgctgccccaccgctcatggccccagagtcagactgccacgtgggacagagctca
gagggcattgtggtgttcattccagagacgagctcgagcacagatgtgcacggtgttcac
ctgcctgactcgtcctctgttgcccagtccaccagcgtgtccagtgtctcgacagtgacg
cagtctatcattgtgtcggaatcggcccaggtggtggtgcactccagtgcagtatcagag
ggagggatgatggtgtccgactccactgcctccacgtcctccgacttgggctctgccatt
gacaaaattatcgagtccacaattggccctgatattatgaatgggtgtattgctgtaaca
agtgcagaggatggcagtgctgagacaacacagtacttgatcctacaaggaccagatgat
ggagctcccatggtggctcagatgtcctcctccgccctgtccagccgcattgccatcgaa
gctctggcagatggacccacttccacctgcctggatcaagtggacatggcagagggcatt
cagggcagcctggaaccggatcagccagaccagccgggacactccggctacccagagcat
gaggctggcagcagcagcagtagtagtagcagtcgccgcagcagccgaccggaccagaca
ggggaggtgcagtacatagagtgcagcagcgagcagcctgatggctcaggccagtcgtct
cgcttccccgactacagcgcggataactctgacgggccactgcagggctatgccgagtgc
agcggcaccgattcctcctcgcccccgcgccacacccgctacgtggtcgagtgcagcgat
ggcggctacctggagtgcagcaccgtagagagtgggtccgagcggccgcagcactcgcac
tacatcgacagcagcgtggtcccacaacggagctcgcgatacgccgattgcgtgaccgcg
gggcccgagcagcccggctgctcgcactaccaggagcgggagagcactcagccggatcag
ccccggtgctcccaggacggaccggagcactccggctacatggagtgcagcacgggccag
ggttcgctgtacgcggatgagggcacgtcgtcgcagggctccctggccgacacagcgggg
agcagcggcctgcccgtgcagatggactgcagcgagagccagtcagggacctacatcagc
agcagcgggacctactccgcgcagcccgagacagaggtggtccaggagtggtcccctgat
gccgaagctggacagcaggctgatgacatggtggccgagtcgggtgtggaggtgggacct
ggggaccgggcacccaacctggccgaactggaggagatgatggaggtggtgatcgtacag
cagttcaagtgcaaaatgtgcccctacaaaagtgtctcaaaagacacactgattaaccac
atgagggacagacatttcaagcctgctggtcctccaccaaaaaagcggggtcgaggtaga
cctcggcggtcagactcagtggttcgccaggtggtggaggtgaaggtggaggagccagcg
gaggaagaagatgatgacattgtggacgctggcgcaatagatgaccctgaagaggacagc
gactacagcccagcagataaagagtaccgcagcagaccgtctgtatctcaacgccaggcc
ccctcctcctgcccatcctcctcccaggacagacctcgacgtagggttgggagaccaaag
aaattcagctacttctatggcaatcagggtaggcctgaagaggcagagggttcatctaaa
actaatgggagtgtggacgctcggccatctgaagaagctagttcctctgggctggggaat
ggaaccccctcattggccaatgggagccaagctgaaccaggggtcagccaatcagattct
gagaacaaagacccatcatcaaacactgggcccgatgagacagagttttatccaaggaaa
cgtggccggccctccaagaggtttctgcggaagaaatataaaaagtatatgaatcgcaac
aggtattataaatcactgaaacccctcctgagacctcataactgctggatctgtggctct
cgctttctctctcaagacgacctcagattccacattgaatcacatgaaggcaacgaccca
gagtgcttcaaatgccttcagtgcaactatcgatgcaagcgctggtcttcactaaaggag
cacatgttcaaccatgagggaaccaagccttataaatgtgaggagtgtgactacacaagt
gtttacaagaaagatgtgatccggcactcagctgttcataacaaagacaaaaaaaagaag
ccagatttggtgcctaagatctcccagttcccttgcccaatatgccacagagtctacccc
atgcaaaagcgcctcacccagcacatgaaaacccacagcaatgagaagccacacgtctgt
gacaagtgtgggaagtcctttaagaagcgctacacttttaaaatgcaccttttaactcat
atccagagttgtggaaacagcaggtatgagaagacagggtttaagtgtgagttttgtgag
tacacgtgtgacaacaagaagctcctgctgaatcaccagctgtctcataccagtgacaag
cccttcaaatgtgactactgcaaatactccaccaccaaagaggacttccttgtgtctcat
atggccataaagcacacgggagagaagcctttctcatgcgagctgtgccacttcatgacc
aagcaccggaagaacctgcggctgcacgtgcagtgccgccacccggaggcgtttgaggag
tggagccaggcgcacccagaggagccagtgcgccgccggcgccggcccttcttcaccctg
cagcagatcgaggacctcaagcagcagcacgaggcccaggggctccagaacaccattgtg
tcggtggatcccgtcacccttcaggctatgcacggcattgacaatgcctctgtggcccaa
gacgcacagggaaacacgaccatcatctatgagcaaggctcctcagacctatcagcccag
aatgcccttgatctgcttctgaacatgagcaatgcccgtgagcttgtgggaaactcacta
caggttgcggtgctgaagtcagacggtaagacgctggagcctggcacgtgggtggaggcc
gaggagggcactcagtccacctcactgcagtcccagaaggtggtgacatttcacgtggcg
gagaacggggagacactggtgcaggaggccttcgagtccagcatgggggaggcgggcggg
gagatcactcagatcgccatcagcgcctacgagggctcgggtgacttcagtgtggtggag
caggccgccgaggagatccacagcacagacccatcatacagcagtgcggaggatgtcccc
acagacgctcagcccatggaggtgagcagtgacggcgcgtctgactccggaacgctccgc
gagcacaaagacaagttctacctgagctccggcctgaccgaaggggtcatgcagcaggtg
gagctgagcagcgaggcctcaggctctccttcctcccgacagcagctcaacaccaaaagg
ttctcctgccgcatctgcatggagtctttccacggccgctccgacatggagaaccacaag
agggcgcacattgaccccagcaccttcaagtgccctgactgcgaattcaccgccgcctcc
tggcctgaagttaagactcacatggcgctgcattcctacctgcggccgcacaaatgcacc
agctgcagtttcgcctccaagaacaagaaggacctccggcgccatatgatgacccacacc
aatgagaagccgtttgcctgtgagatctgtgggcagaggtttaaccgcaacggtcacctg
aagttccacatggagaggctgcacagccaggaccctccagtccgcaagccccgaccgggc
acgtctcagcagacaatcatcgtcaacagcgacgaggaggccctggccaccctgcagtca
gccctgcaggccggccaaacggtcatcagccccgagcagttgcagcaggccctgggccag
gagcacatcattgtcgctcaggagcaaacactctctgaccaggaggaggcaacatatatc
cagcagatcaccactgtggacgggcagacagtccagcaccttatgactgctgataaccag
gttcagtacatcatctcccaggacggagtccagcacttaatcccccaggagtatgtggta
gtgtctgatggcaaccacattcagatgccagatggccagatagcccagatccagtatgag
cacgacggcacatttctgcaggagcagcagattgcactgacgcacgatgggcagattcag
tatgtgcctctcaactccgagcagcagatcgtcagccacgaggacctggaggctgcggcc
cattcagcggtgacggccgttgcagatgcagccatggcgcaagtacagaccgtctacacc
accgaggccacgcctgaacagctggagcagatgcagcagcagggcatccactacgatgtc
atcacattctctgaagactag
DBGET
integrated database retrieval system
